PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G021573_P02
Common NameEREB161, LOC100384380, ZEAMMB73_355599
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 291aa    MW: 31374.1 Da    PI: 8.3084
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G021573_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2483e-152576155
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       s y+GV++++++grW ++I  +     +k  +lg+f t eeAa+a++ a+ k++g
  GRMZM2G021573_P02 25 SIYRGVTRHHQQGRWQSRIGRVAG---NKDLYLGTFTTQEEAAEAYDIAAIKFRG 76
                       57****************988532...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.7E-172585IPR016177DNA-binding domain
CDDcd000181.91E-232586No hitNo description
PfamPF008473.8E-92576IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-182684IPR001471AP2/ERF domain
SMARTSM003803.0E-302690IPR001471AP2/ERF domain
PROSITE profilePS5103218.5972684IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MKGMTRQEFV AHLRRRSSGF SRGASIYRGV TRHHQQGRWQ SRIGRVAGNK DLYLGTFTTQ  60
EEAAEAYDIA AIKFRGLNAV TNFDIARYDV DKIMESSTLL AVEEARKVKA VEAASSAPMT  120
HTHSGGKEQL NATTAEETSS AGWRMVLHGS PHQLEAARCP EAADLQSAIM NNDSHPRPSL  180
HGIAGLDIEC AVHDHHDHLD VPAGSRTTAA GSINFSNSSS QVTSLGNSRE GSPERLGLAM  240
MYGKQPSSAV SLAATMSPWT PVAAQTVAHV LKQQPNVVVS HRPVFAAWAD A
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G021573
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G021573_P02
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0699790.0BT069979.1 Zea mays full-length cDNA clone ZM_BFb0363I04 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001349283.10.0uncharacterized protein LOC100384380
TrEMBLC0PNW00.0C0PNW0_MAIZE; AP2-EREBP transcription factor
STRINGGRMZM2G021573_P010.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.17e-44AP2 family protein