PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G017145_P05 | ||||||||
Common Name | Zm.86044 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bHLH | ||||||||
Protein Properties | Length: 70aa MW: 7822.99 Da PI: 10.9481 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.6 | 1.5e-05 | 37 | 63 | 1 | 27 |
CHHHHHHHHHHHHHHHHHHHHHHHCTS CS HLH 1 rrrahnerErrRRdriNsafeeLrell 27 +++ ++erE+r Rd+ N+ f eL +l GRMZM2G017145_P05 37 KKVHKSEREKRKRDKQNDLFGELGNML 63 67889******************9887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.45E-5 | 29 | 65 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 70 aa Download sequence Send to blast |
MVPRDRAHSA AAATAPPTEK PVQGPIQNNK CEKKAPKKVH KSEREKRKRD KQNDLFGELG 60 NMLGMRSVTN |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Zm.86044 | 2e-62 | embryo| endosperm| meristem| ovary| shoot |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G017145 |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that plays a positive role in salt stress tolerance. Interacts with TIFY11A/JAZ9 and binds to the promoter of some potassium ion transporter genes to regulate potassium homeostasis during salt stress. {ECO:0000269|PubMed:25617318}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G017145_P05 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU962251 | 1e-102 | EU962251.1 Zea mays clone 241273 amelogenin precursor like protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001149147.1 | 6e-38 | uncharacterized protein LOC100282769 | ||||
Swissprot | Q69V10 | 2e-16 | BH062_ORYSJ; Transcription factor BHLH062 | ||||
TrEMBL | A0A1D6IKG7 | 1e-36 | A0A1D6IKG7_MAIZE; Amelogenin like protein | ||||
TrEMBL | A0A3L6E3W6 | 1e-36 | A0A3L6E3W6_MAIZE; Transcription factor bHLH47 | ||||
TrEMBL | B6TB86 | 1e-36 | B6TB86_MAIZE; Amelogenin like protein | ||||
STRING | GRMZM2G017145_P02 | 2e-37 | (Zea mays) |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G017145_P05 |
Publications ? help Back to Top | |||
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