PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G016150_P01 | ||||||||
Common Name | bZIP128 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 405aa MW: 42352.9 Da PI: 4.9427 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42 | 2.1e-13 | 214 | 265 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 + +rrkq+NRe+ArrsR RK a + eLe v++L eN++L +l +++ GRMZM2G016150_P01 214 RLQRRKQSNRESARRSRSRKAAHLNELEAQVAQLRVENSSLLRRLADVNQKF 265 679**************************************98887777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.3E-15 | 210 | 274 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.254 | 212 | 267 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-9 | 213 | 266 | No hit | No description |
Pfam | PF00170 | 3.6E-10 | 214 | 263 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.81E-9 | 214 | 263 | No hit | No description |
CDD | cd14702 | 4.22E-6 | 216 | 266 | No hit | No description |
Pfam | PF12498 | 8.6E-50 | 281 | 398 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042802 | Molecular Function | identical protein binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence Send to blast |
MERVFSVEEI PNPYWVPPHP QSAAAGAVAA PAGEAAGLMN RCPSEWYFQK FLEEAVLDSP 60 VPVAGVSRGS VGAGVEAAER KTPGTAAAAA ASSSVVDPVE YNAMLKQKLE KDLAAVALWR 120 ASGAAPPDNS PAGSSLPSVD VPHAGPLKPM GGTGSLVQNK LAGAPGGGSS PHVVQNADIP 180 VKQTTSSSSR EQSDDDDMEG DAETTGNGNP VQQRLQRRKQ SNRESARRSR SRKAAHLNEL 240 EAQVAQLRVE NSSLLRRLAD VNQKFNEAAV DNRVLKADVE TLRAKVKMAE DSVKRVTGMN 300 TLFPAVSDMS SLSMPFNGSP SDSASDAAVP IQDDLNSYFA NPSEIGGSNG YMPDIASSAQ 360 EDDDFVNGAQ VAGKMGSTDS LQRVASLEHL QKRMCGGPAS SGSTS |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Zm.16 | 0.0 | ear| meristem| ovary| shoot |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G016150 |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed in developing seeds from 5 to 30 days after flowering (DAF). {ECO:0000269|PubMed:11133985}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds to the DNA specific sequence 5'-GCCACGT[AC]AG-3' found in the alpha-globulin gene promoter (PubMed:9049271, PubMed:11572990). Does not bind to promoters of other major storage genes such as glutelin, prolamin and albumin (PubMed:9049271). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:11572990, ECO:0000269|PubMed:9049271}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00040 | PBM | Transfer from AT5G28770 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G016150_P01 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ728355 | 0.0 | KJ728355.1 Zea mays clone pUT6637 bZIP transcription factor (bZIP128) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001105687.1 | 0.0 | opaque2 heterodimerizing protein 1 | ||||
Swissprot | Q7X9A8 | 1e-179 | RSBZ2_ORYSJ; bZIP transcription factor RISBZ2 | ||||
TrEMBL | A0A060CZ75 | 0.0 | A0A060CZ75_MAIZE; BZIP transcription factor (Fragment) | ||||
STRING | GRMZM2G016150_P01 | 0.0 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3488 | 38 | 78 | Representative plant | OGRP1839 | 16 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.2 | 2e-39 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G016150_P01 |
Publications ? help Back to Top | |||
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