PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G011932_P04
Common NameLOC100191525
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 317aa    MW: 33682.6 Da    PI: 8.6847
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G011932_P04genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.23.3e-22184246163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+elkre+rkq+NRe+ArrsR+RK+ae+eeL++ v++L aeN++L++e+ +l++ ++kl+ e+
  GRMZM2G011932_P04 184 ERELKREKRKQSNRESARRSRLRKQAETEELATQVESLAAENTSLRSEIGQLTESSEKLRLEN 246
                        89*********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077775.9E-8132IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1703.3E-18179243No hitNo description
PfamPF001706.0E-21184246IPR004827Basic-leucine zipper domain
SMARTSM003382.1E-22184248IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.231186249IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.56E-11187242No hitNo description
CDDcd147021.43E-20189237No hitNo description
PROSITE patternPS000360191206IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MWGPQPIMPP PFGTPYAAVY PHGGAYPHPL VPMMSTPMSV EPAKSTNSKE KNSNKKLKEI  60
DRTAVSAGSG NSKRTVSSIE DYSAEGSSDV NDQNVNETSR KRSSDGGPGA ETTTGGNTEC  120
VLAPNHTLGN ATILPQHCFS APVIKPSATN VANSRAIGTA LSPPPGVMVP VHNAVPSDLS  180
VKDERELKRE KRKQSNRESA RRSRLRKQAE TEELATQVES LAAENTSLRS EIGQLTESSE  240
KLRLENSALM VKLKDTAEPS PIKASASPSS PRASAENFLS MIDSANAPSV SRHTEHGGPR  300
LRQLLDSSPA TDVAAVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1200206RRSRLRK
2200207RRSRLRKQ
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G011932
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G011932_P04
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0336250.0BT033625.1 Zea mays full-length cDNA clone ZM_BFc0117G20 mRNA, complete cds.
GenBankBT0624120.0BT062412.1 Zea mays full-length cDNA clone ZM_BFb0293N02 mRNA, complete cds.
GenBankBT0627840.0BT062784.1 Zea mays full-length cDNA clone ZM_BFb0346H09 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001130428.10.0G-box binding factor 1
RefseqXP_008648295.10.0G-box binding factor 1 isoform X1
RefseqXP_008648296.10.0G-box binding factor 1 isoform X1
RefseqXP_023156092.10.0G-box binding factor 1 isoform X1
TrEMBLC0P2930.0C0P293_MAIZE; Uncharacterized protein
STRINGGRMZM2G011932_P010.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-34G-box binding factor 3