PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G006745_P06
Common NameDBP1a, DREB2, ZEAMMB73_291925, Zm.7368
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 248aa    MW: 26545.2 Da    PI: 4.0446
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G006745_P06genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-201262155
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                       +gy+GVr++  +g+WvAeIr+p   + r  r +lg+f tae+Aa+a+++a+++++g
  GRMZM2G006745_P06 12 CGYRGVRQRT-WGKWVAEIREP---N-RvDRLWLGTFPTAEDAARAYDEAARAMYG 62
                       79*****999.**********8...2.58***********************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.14E-311270No hitNo description
PfamPF008478.6E-141262IPR001471AP2/ERF domain
PROSITE profilePS5103222.5761370IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-211370IPR016177DNA-binding domain
SMARTSM003804.1E-341376IPR001471AP2/ERF domain
PRINTSPR003679.3E-111425IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.2E-321470IPR001471AP2/ERF domain
PRINTSPR003679.3E-113652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0010224Biological Processresponse to UV-B
GO:0010286Biological Processheat acclimation
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000037anatomyshoot apex
PO:0006310anatomytassel floret
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0006341anatomyprimary shoot system
PO:0006354anatomyear floret
PO:0006505anatomycentral spike of ear inflorescence
PO:0008018anatomytransition vascular leaf
PO:0009001anatomyfruit
PO:0009009anatomyplant embryo
PO:0009025anatomyvascular leaf
PO:0009054anatomyinflorescence bract
PO:0009066anatomyanther
PO:0009074anatomystyle
PO:0009084anatomypericarp
PO:0009089anatomyendosperm
PO:0020040anatomyleaf base
PO:0020104anatomyleaf sheath
PO:0020126anatomytassel inflorescence
PO:0020127anatomyprimary root
PO:0020136anatomyear inflorescence
PO:0020142anatomystem internode
PO:0020148anatomyshoot apical meristem
PO:0025142anatomyleaf tip
PO:0025287anatomyseedling coleoptile
PO:0001007developmental stagepollen development stage
PO:0001009developmental stageD pollen mother cell meiosis stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001083developmental stageinflorescence development stage
PO:0001094developmental stageplant embryo coleoptilar stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0001180developmental stageplant proembryo stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007003developmental stageIL.03 full inflorescence length reached stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007015developmental stageradicle emergence stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007022developmental stageseed imbibition stage
PO:0007026developmental stageFL.00 first flower(s) open stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007032developmental stagewhole plant fruit formation stage up to 10%
PO:0007045developmental stagecoleoptile emergence stage
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007094developmental stageLP.01 one leaf visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007104developmental stageLP.15 fifteen leaves visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007112developmental stage1 main shoot growth stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007123developmental stageLP.06 six leaves visible stage
PO:0007633developmental stageendosperm development stage
PO:0021004developmental stageinflorescence initiation stage
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MKGKGGPDNT QCGYRGVRQR TWGKWVAEIR EPNRVDRLWL GTFPTAEDAA RAYDEAARAM  60
YGDLARTNFP GQDATTSAQA ALSSTSAQAA PTAVEALQTG TSCESTTTSN HSDIASTSHK  120
LEASDISSYL KEKCPAGSCG IQDGTPIVAD KEVFGPLEPI TNLPDGGDGF DIGEMLRMME  180
SDPHNAGGAD AGMGQPWYLD ELDSSVLESM LQPEPEPEPE PFLMSEEPDM FLAGFESAGF  240
VEGLERLN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-161470360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.73680.0cell culture| ear| endosperm| leaf| meristem| ovary| pollen
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G006745
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Involved in drought and heat-shock stress tolerance. {ECO:0000269|PubMed:20049613}.
Function -- GeneRIF ? help Back to Top
  1. Osmotic stress activates the transcription of the ZmDREB2A gene by increasing the levels of acetylated histones H3K9 and H4K5 associated with the ZmDREB2A promoter region.
    [PMID: 24299295]
  2. Under stress conditions, both the ZmGOLS2- and the ZmDREB2A- expressing plants had greater germination percentages, greater percentages of seedlings becoming autotropic, and/or greater survival percentages during/after stress than the control plants.
    [PMID: 26584560]
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G006745_P06
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, high-salt and drought stresses. {ECO:0000269|PubMed:20049613}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0625870.0BT062587.1 Zea mays full-length cDNA clone ZM_BFb0317N19 mRNA, complete cds.
GenBankBT0842250.0BT084225.1 Zea mays full-length cDNA clone ZM_BFb0090O13 mRNA, complete cds.
GenBankFJ8057470.0FJ805747.1 Zea mays DRE-binding protein 1a (DBP1a) mRNA, complete cds.
GenBankFJ8057480.0FJ805748.1 Zea mays DRE-binding protein 1c (DBP1c) mRNA, complete cds.
GenBankFJ8057490.0FJ805749.1 Zea mays DRE-binding protein 1b (DBP1b) mRNA, complete cds.
GenBankJF9158340.0JF915834.1 Zea mays dehydration responsive element binding protein 2 (DREB2) and dehydration responsive element binding protein 2 isoform b (DREB2) genes, complete cds, alternatively spliced.
GenBankJF9158350.0JF915835.1 Zea mays dehydration responsive element binding protein 2 isoform c (DREB2) mRNA, complete cds, alternatively spliced.
GenBankJF9158360.0JF915836.1 Zea mays dehydration responsive element binding protein 2 isoform a (DREB2) mRNA, complete cds, alternatively spliced.
GenBankJF9158370.0JF915837.1 Zea mays dehydration responsive element binding protein 2 isoform b (DREB2) mRNA, complete cds, alternatively spliced.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001292874.10.0dehydration-responsive element binding protein 2A isoform 2
RefseqXP_020397925.10.0dehydration-responsive element binding protein 2A isoform X4
RefseqXP_023156565.10.0dehydration-responsive element binding protein 2A isoform X3
SwissprotQ5W6R46e-50DRE2B_ORYSJ; Dehydration-responsive element-binding protein 2B
TrEMBLA0A1D6FNX00.0A0A1D6FNX0_MAIZE; Dehydration-responsive element-binding protein 2A
TrEMBLC0P2R80.0C0P2R8_MAIZE; Dehydration responsive element binding protein 2 isoform b
STRINGGRMZM2G006745_P020.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.14e-24ERF family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Cheng CH, et al.
    A fine physical map of the rice chromosome 5.
    Mol. Genet. Genomics, 2005. 274(4): p. 337-45
    [PMID:16261349]
  3. Qin F, et al.
    Regulation and functional analysis of ZmDREB2A in response to drought and heat stresses in Zea mays L.
    Plant J., 2007. 50(1): p. 54-69
    [PMID:17346263]
  4. Zhao L, et al.
    Promoter-associated histone acetylation is involved in the osmotic stress-induced transcriptional regulation of the maize ZmDREB2A gene.
    Physiol Plant, 2014. 151(4): p. 459-67
    [PMID:24299295]
  5. Gu L, et al.
    ZmGOLS2, a target of transcription factor ZmDREB2A, offers similar protection against abiotic stress as ZmDREB2A.
    Plant Mol. Biol., 2016. 90(1-2): p. 157-70
    [PMID:26584560]