PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AC208663.3_FGP002
Common NameNAC34
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family NAC
Protein Properties Length: 362aa    MW: 40789.1 Da    PI: 9.2172
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AC208663.3_FGP002genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM317.3e-105116112126
                NAM  12 eelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                        ++lv +yL ++ + +  el   i+++d+y ++P  L k    ++++++ ew+fF++r +        +r + +g  +  g+ k+v +     
  AC208663.3_FGP002  51 DDLVGRYLPARRALRWSELPPQIHDADVYGAHPAFLAKvhpPANGGDRlEWFFFVCRGRGLGG----KRRAGRGAYRLVGEAKPVAA----- 133
                        689*****99988888888778**************8445533445557********997653....444566999*********98..... PP

                NAM 100 vglkktLvfykg..rapkgektdWvmhey 126
                         +  +++ +y+   +a+ +++t W m+ey
  AC208663.3_FGP002 134 -WYCHSFRYYEDaaEASASRETGWRMDEY 161
                        .8899*****6423777788********9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100515.65340183IPR003441NAC domain
PfamPF023656.1E-551161IPR003441NAC domain
SuperFamilySSF1019411.44E-1951181IPR003441NAC domain
PROSITE profilePS5100510.81200358IPR003441NAC domain
SuperFamilySSF1019418.76E-17211356IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MSPKKPAAPG ATDPAAYTSP RDEDTNDGWV LVTAGVGRPP RPPPRRGNSP DDLVGRYLPA  60
RRALRWSELP PQIHDADVYG AHPAFLAKVH PPANGGDRLE WFFFVCRGRG LGGKRRAGRG  120
AYRLVGEAKP VAAWYCHSFR YYEDAAEASA SRETGWRMDE YGDRSDVSGA GAFDMVVCKV  180
YPARGGVLHR RLVQHSTTPA EKRAVVPVKP QVLVQLYLAS RSVGDPLRCR MHHATDVCAD  240
HPAVLTAVLP PANDRFEWFF VVRRPRTKHG DDAIIGFPRR AGPGQYVPAT RYWCVKDGEG  300
RNMGYLLVFL YREDDEATRR LSRAEKWWME EYGFGPDFPY DDNDNDVEEL VVFKVHLRMT  360
RR
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAC208663.3_FG002
Cis-element ? help Back to Top
SourceLink
PlantRegMapAC208663.3_FGP002
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7270240.0KJ727024.1 Zea mays clone pUT4005 NAC transcription factor (NAC34) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025825360.11e-150uncharacterized protein LOC112900773
TrEMBLA0A060CZR70.0A0A060CZR7_MAIZE; NAC transcription factor (Fragment)
STRINGAC208663.3_FGP0020.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP147671819
Representative plantOGRP1481644