PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AC208110.2_FGP001
Common NameZEAMMB73_393959
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 527aa    MW: 55933.6 Da    PI: 6.2946
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AC208110.2_FGP001genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.43.8e-10237258223
                        --SS-EEEEEEE--TT-SS-EE CS
               WRKY   2 dDgynWrKYGqKevkgsefprs 23 
                        +D ++WrKYGqK++kgs++pr+
  AC208110.2_FGP001 237 SDLWAWRKYGQKPIKGSPYPRH 258
                        699******************6 PP
2WRKY49.48.9e-163013382359
                        EEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY  23 sYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        +YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  AC208110.2_FGP001 301 GYYRCSSSkGCSARKQVERSRNDPNMLVITYTSEHNHP 338
                        7*****998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081124.834231340IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-26234256IPR003657WRKY domain
SuperFamilySSF1182904.97E-7235258IPR003657WRKY domain
SMARTSM007742.7E-31236339IPR003657WRKY domain
PfamPF031061.4E-5238259IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-26300340IPR003657WRKY domain
PfamPF031061.2E-12301338IPR003657WRKY domain
SuperFamilySSF1182908.37E-13301340IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    Send to blast
MCDFFLPRME GDQAGGGDLT DIVRSGGAVP SSAAEATARD EWQLHQGEPP MLFPPLPSST  60
ATASEAGCAA GSTGANVFGA DDPFSGLVDP FCTDYYSSCA DFLDATMPDA MPKVGFDAAI  120
CGGSGSGCGG GGGQGQLIDV RRKQPLLPRG VQMLPVGALA PREIQPYPAF ASDMVKLGIT  180
AGQVAGCAID AAVVGMQMPS PRAAGGIKRR KNQARKVVCI PAPTAAGGRP TGEVVPSDLW  240
AWRKYGQKPI KGSPYPRHVL IRHASTNYLG LRFKGNINLK LNKQTAGDKL EFKQDIWGCL  300
GYYRCSSSKG CSARKQVERS RNDPNMLVIT YTSEHNHPWP TQRNALAGST RNHHGKNSSG  360
SSGSKGSQNE KQEQQQPSNV KEEPKDPAAT TTATSTITTL TTSISPAAVV KEETLAAGSS  420
EALGQVMDTA VADHNIELMD QVFSESYRPM IPEAGHPDDF FSDLAELESD PMSLIFSKEY  480
MEAKPSGGDR GHHEKAISKD LDPLFDMLDW SANSSSAGSS FEQGKRG
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAC208110.2_FG001
Cis-element ? help Back to Top
SourceLink
PlantRegMapAC208110.2_FGP001
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008663553.10.0probable WRKY transcription factor 35
TrEMBLA0A3L6G7410.0A0A3L6G741_MAIZE; Putative WRKY transcription factor 35
STRINGAC208110.2_FGP0010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25923888
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.18e-56WRKY DNA-binding protein 35