PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AC197146.3_FGP002
Common NameMYB69, ZEAMMB73_672261, Zm.7564
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family MYB
Protein Properties Length: 289aa    MW: 31777.8 Da    PI: 8.0744
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AC197146.3_FGP002genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.61e-161461148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                       +g+WT+eEd  lv +v+++G+g+W++++   g+ R+ k+c++rw +yl
  AC197146.3_FGP002 14 KGPWTPEEDIVLVSYVQEHGPGNWRAVPVSTGLMRCSKSCRLRWTNYL 61
                       79********************************************97 PP
2Myb_DNA-binding48.42.2e-1567112148
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        rg++T+ E+ ++v++ ++lG++ W++Ia++++  Rt++++k++w+++l
  AC197146.3_FGP002  67 RGNFTPHEEGIIVHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112
                        89********************.*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.4E-23564IPR009057Homeodomain-like
PROSITE profilePS5129416.639961IPR017930Myb domain
SuperFamilySSF466893.09E-3011108IPR009057Homeodomain-like
SMARTSM007175.0E-121363IPR001005SANT/Myb domain
PfamPF002493.2E-151461IPR001005SANT/Myb domain
CDDcd001675.59E-111661No hitNo description
PROSITE profilePS5129423.20862116IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.8E-2465116IPR009057Homeodomain-like
SMARTSM007173.3E-1366114IPR001005SANT/Myb domain
PfamPF002492.7E-1367112IPR001005SANT/Myb domain
CDDcd001673.22E-1069112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MGRPPCCDKA GVKKGPWTPE EDIVLVSYVQ EHGPGNWRAV PVSTGLMRCS KSCRLRWTNY  60
LRPGIRRGNF TPHEEGIIVH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLRKQQ  120
AIGAIFAPPR PSEPTAGHAD CRRHDMTRSS KDSHAACPAD STPAADEVVT QLIAQQFAAT  180
DGDTSSSSSY SYASSTDNIS KLLNGFMMKS ASPARDDATD TIKTSSAIDI DPFDHKSGGA  240
ALPPPKKRQQ QQHLSSIENW LFDDATEQLV VQLMEEISGG SCSVPMLLY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A8e-25141164105MYB PROTO-ONCOGENE PROTEIN
1h88_C4e-241411658159MYB PROTO-ONCOGENE PROTEIN
1h89_C4e-241411658159MYB PROTO-ONCOGENE PROTEIN
1h8a_C1e-241211625128MYB TRANSFORMING PROTEIN
1mse_C9e-25141164105C-Myb DNA-Binding Domain
1msf_C9e-25141164105C-Myb DNA-Binding Domain
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.75640.0meristem| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAC197146.3_FG002
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: During seed development, gradually down-regulated towards the onset of ripening (veraison). During berry skin development, dramatic decrease to full repression at veraison, followed by a slight increase towards ripening. In flowers, barely detectable in stamens, at the interface of filaments and anthers. {ECO:0000269|PubMed:22018045}.
UniprotTISSUE SPECIFICITY: Restricted to stomatal guard cells. Mostly expressed in leaves, cotyledons, hypocotyls, seeds and ripened berry skins. {ECO:0000269|PubMed:22018045}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in the regulation of gene (e.g. drought-regulated and flavonoid biosynthetic genes) expression and stomatal movements leading to negative regulation of responses to drought and responses to other physiological stimuli (e.g. light). {ECO:0000269|PubMed:22018045}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAC197146.3_FGP002
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by abscisic acid (ABA) and osmotic stress (salt stress). {ECO:0000269|PubMed:22018045}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7283080.0KJ728308.1 Zea mays clone pUT6588 MYB transcription factor (MYB69) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001358032.10.0uncharacterized protein LOC115100998
SwissprotB3VTV72e-86MYB60_VITVI; Transcription factor MYB60
TrEMBLK7TLS00.0K7TLS0_MAIZE; MYB transcription factor
STRINGAC197146.3_FGP0020.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22938296
Representative plantOGRP5171784
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.11e-82myb domain protein 60
Publications ? help Back to Top
  1. Jaillon O, et al.
    The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.
    Nature, 2007. 449(7161): p. 463-7
    [PMID:17721507]