PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AC193630.3_FGP003
Common NameZEAMMB73_019671
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 347aa    MW: 38315 Da    PI: 8.124
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AC193630.3_FGP003genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY63.34.1e-20247289142
                        ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-S CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversa 42 
                        ++Dg++WrKYGqK+ kg+++pr+YYrCt a gCpv+k+  +++
  AC193630.3_FGP003 247 MNDGCQWRKYGQKVAKGNPCPRAYYRCTVAaGCPVRKQNPTKK 289
                        58***************************99******965554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.6E-20232285IPR003657WRKY domain
SuperFamilySSF1182901.31E-17240286IPR003657WRKY domain
PROSITE profilePS5081119.313242284IPR003657WRKY domain
SMARTSM007748.0E-16247301IPR003657WRKY domain
PfamPF031065.6E-17248285IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MDEASNQTST NLKAHNKVKR HCAYTNNLQK FIIVDKDNLA STRAEMGEVR EENKRLKTML  60
SRIVEDYRSL QLQFHDVLQK GEPMEKKLAD HRPSTITPPT GIEESEFVSL SLGTGTGTHK  120
KEEKSVIISA AEGKWREDYL MMGVKEEEGL SLGLSSSARK DDDGAANNTG KVQPDVTTLS  180
PEASSEDAKD DDTTEAADRQ WLPSNTQKKS RNVGATEPED DDDVGPLLPQ TKKTRVSVRA  240
RCDAPTMNDG CQWRKYGQKV AKGNPCPRAY YRCTVAAGCP VRKQNPTKKN TLLIELVNQE  300
IIPLAPHHGS KIKIRTTIDL GIRDSGAYRI EKIQGAGEAA AGAARER
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAC193630.3_FG003
Cis-element ? help Back to Top
SourceLink
PlantRegMapAC193630.3_FGP003
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008660727.10.0probable WRKY transcription factor 72
TrEMBLA0A3L6DC830.0A0A3L6DC83_MAIZE; Putative WRKY transcription factor 72
STRINGAC193630.3_FGP0030.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50473862
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.11e-43WRKY DNA-binding protein 72