PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AC193630.3_FGP003 | ||||||||
Common Name | ZEAMMB73_019671 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | WRKY | ||||||||
Protein Properties | Length: 347aa MW: 38315 Da PI: 8.124 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 63.3 | 4.1e-20 | 247 | 289 | 1 | 42 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-S CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversa 42 ++Dg++WrKYGqK+ kg+++pr+YYrCt a gCpv+k+ +++ AC193630.3_FGP003 247 MNDGCQWRKYGQKVAKGNPCPRAYYRCTVAaGCPVRKQNPTKK 289 58***************************99******965554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 7.6E-20 | 232 | 285 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.31E-17 | 240 | 286 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 19.313 | 242 | 284 | IPR003657 | WRKY domain |
SMART | SM00774 | 8.0E-16 | 247 | 301 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.6E-17 | 248 | 285 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence Send to blast |
MDEASNQTST NLKAHNKVKR HCAYTNNLQK FIIVDKDNLA STRAEMGEVR EENKRLKTML 60 SRIVEDYRSL QLQFHDVLQK GEPMEKKLAD HRPSTITPPT GIEESEFVSL SLGTGTGTHK 120 KEEKSVIISA AEGKWREDYL MMGVKEEEGL SLGLSSSARK DDDGAANNTG KVQPDVTTLS 180 PEASSEDAKD DDTTEAADRQ WLPSNTQKKS RNVGATEPED DDDVGPLLPQ TKKTRVSVRA 240 RCDAPTMNDG CQWRKYGQKV AKGNPCPRAY YRCTVAAGCP VRKQNPTKKN TLLIELVNQE 300 IIPLAPHHGS KIKIRTTIDL GIRDSGAYRI EKIQGAGEAA AGAARER |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | AC193630.3_FG003 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AC193630.3_FGP003 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008660727.1 | 0.0 | probable WRKY transcription factor 72 | ||||
TrEMBL | A0A3L6DC83 | 0.0 | A0A3L6DC83_MAIZE; Putative WRKY transcription factor 72 | ||||
STRING | AC193630.3_FGP003 | 0.0 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5047 | 38 | 62 | Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 1e-43 | WRKY DNA-binding protein 72 |
Link Out ? help Back to Top | |
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Phytozome | AC193630.3_FGP003 |