PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AC186606.4_FGP003 | ||||||||
Common Name | bZIP126, LOC100286290 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 202aa MW: 22494.2 Da PI: 7.0028 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.3 | 2.5e-11 | 107 | 160 | 4 | 57 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r rr+ +NRe+ArrsR RK+ ++ eL v L + N++L + l++ +a AC186606.4_FGP003 107 ERRRRRMVSNRESARRSRMRKQRQLSELWAQVSHLRGANRRLLDDLNRALRSCA 160 5899***************************************99998777766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 8.9E-9 | 103 | 159 | No hit | No description |
SMART | SM00338 | 7.2E-10 | 104 | 168 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.6E-9 | 106 | 158 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.243 | 106 | 169 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.86E-10 | 108 | 156 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 111 | 126 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.44E-14 | 113 | 160 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MYHHHFHGEV ASLRFLSPPN VSTSFAAHHH MNMALPPPSY FQDDDATLAA IDGGDAACFD 60 ELDTIVVVPE ADAAAAARCH LTGSNNGGLS DSDQLLDAAV IMAADEERRR RRMVSNRESA 120 RRSRMRKQRQ LSELWAQVSH LRGANRRLLD DLNRALRSCA DARRESARLR EEKAELTKKL 180 EQLLQAEKGS LSEAAEPCKS YC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 120 | 127 | RRSRMRKQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Zm.49800 | 0.0 | shoot |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | AC186606.4_FG003 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AC186606.4_FGP003 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU976632 | 0.0 | EU976632.1 Zea mays clone 985663 bZIP protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001152649.1 | 1e-147 | uncharacterized protein LOC100286290 | ||||
TrEMBL | B6UHB7 | 1e-145 | B6UHB7_MAIZE; BZIP protein | ||||
STRING | AC186606.4_FGP003 | 1e-146 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 | Representative plant | OGRP13025 | 4 | 5 |
Link Out ? help Back to Top | |
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Phytozome | AC186606.4_FGP003 |
Entrez Gene | 100286290 |
Publications ? help Back to Top | |||
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