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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_015901844.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family |
GRAS |
Protein Properties |
Length: 545aa MW: 61197.5 Da PI: 6.4162 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_015901844.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 425 | 6.3e-130 | 175 | 545 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
l+e+L++cA+avs++dl +a l++ l +++s +gdp+qRl ay++e+L+arl +s+s++ykal+++e + sse l++++++++++P+ +f++
XP_015901844.1 175 LKEVLIHCARAVSDSDLPAAMDLMELLGHMVSVSGDPIQRLGAYLLEGLRARLEKSGSSIYKALKCEEPT---SSELLSYMSVLYQICPYWRFAY 266
5789*****************************************************************9...9********************* PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
+ aN I eave+e+r+HiiDf+i qG+QW+aL+q La Rp+gpps+RiT v++p+s + l+ +ge+L++ Ae+ +vpfef+ +a ++
XP_015901844.1 267 VSANVVIKEAVENEQRIHIIDFQIAQGTQWMALIQDLARRPGGPPSIRITCVDDPQSAhaRGGGLRIVGEKLSRHAESWNVPFEFHG-AAMCGSE 360
********************************************************99889999***********************.8999*** PP
GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
+ le+L+++pgEa++ n+ + lh+++desvs++++rd++L+lvkslsPkv+++veq++++n+++F++rfle+l+yy+a+f+s+++ pr++++ri
XP_015901844.1 361 VVLETLQIRPGEAIVANFPFVLHHMPDESVSTQNHRDRLLRLVKSLSPKVMTLVEQDSNTNTSPFFARFLETLDYYTAMFESIDVARPRNDKQRI 455
*********************************************************************************************** PP
GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ E+++++r+ivn++aceg +r+erhe ++kW+ rl++aGF++ pls +++ +k ll++++++ yrvee++g+l+l Wk+r++ + SaWr
XP_015901844.1 456 NAEQQCVARDIVNMIACEGPDRVERHELFGKWSVRLRMAGFTQCPLSPSVNVAIKNLLKEYNGN-YRVEEKDGALYLKWKNRAMATSSAWR 545
**************************************************************77.*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 545 aa
Download sequence Send
to blast |
MQTSQKHKGS GVIHGLYHQP VQEIDPYNFS HFQILENNMC PDIGSRGKSV SFETYKEQYF 60 TLESSPATAD FLVCDSPSAV SVLSNRSSFS PQGSQSCLSD PHHSPDIYSG SPVSGCSVAD 120 DANEFKHKLR ELEITLLGPE SDIVDSCYCC YKRESTSTAR WTHSQMVEMI PRLDLKEVLI 180 HCARAVSDSD LPAAMDLMEL LGHMVSVSGD PIQRLGAYLL EGLRARLEKS GSSIYKALKC 240 EEPTSSELLS YMSVLYQICP YWRFAYVSAN VVIKEAVENE QRIHIIDFQI AQGTQWMALI 300 QDLARRPGGP PSIRITCVDD PQSAHARGGG LRIVGEKLSR HAESWNVPFE FHGAAMCGSE 360 VVLETLQIRP GEAIVANFPF VLHHMPDESV STQNHRDRLL RLVKSLSPKV MTLVEQDSNT 420 NTSPFFARFL ETLDYYTAMF ESIDVARPRN DKQRINAEQQ CVARDIVNMI ACEGPDRVER 480 HELFGKWSVR LRMAGFTQCP LSPSVNVAIK NLLKEYNGNY RVEEKDGALY LKWKNRAMAT 540 SSAWR
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |