PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015900131.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family CAMTA
Protein Properties Length: 981aa    MW: 109205 Da    PI: 7.568
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015900131.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1176.92.6e-55201363118
            CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 
                     +e ++rwl+++ei++iL n++k++lt +++ rp+ gsl+L++rk +ryfrkDG+ w+kkkdgktv+E+hekLK g+v+vl+cyYah+een++fqr
  XP_015900131.1  20 QEaQHRWLRPTEICEILRNYQKFRLTPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEENESFQR 114
                     5559******************************************************************************************* PP

            CG-1  97 rcywlLeeelekivlvhylevk 118
                     r+yw+L+ +le+ivlvhy+evk
  XP_015900131.1 115 RSYWMLDGQLEHIVLVHYREVK 136
                     *******************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143782.20515141IPR005559CG-1 DNA-binding domain
SMARTSM010766.0E-7818136IPR005559CG-1 DNA-binding domain
PfamPF038592.6E-4921134IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.109.1E-7418507IPR013783Immunoglobulin-like fold
CDDcd001029.91E-4419507No hitNo description
SuperFamilySSF812962.97E-17420506IPR014756Immunoglobulin E-set
PfamPF018333.8E-6422505IPR002909IPT domain
SuperFamilySSF484036.08E-16565706IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.203.0E-15604706IPR020683Ankyrin repeat-containing domain
CDDcd002041.18E-13605703No hitNo description
PROSITE profilePS5029716.388611705IPR020683Ankyrin repeat-containing domain
PROSITE profilePS500889.938644676IPR002110Ankyrin repeat
SMARTSM002480.05644673IPR002110Ankyrin repeat
SMARTSM00248910683712IPR002110Ankyrin repeat
SMARTSM00015300762784IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525405.04E-8801867IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.055815837IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.444816845IPR000048IQ motif, EF-hand binding site
PfamPF006120.0018817836IPR000048IQ motif, EF-hand binding site
SMARTSM000155.1E-4838860IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.889839867IPR000048IQ motif, EF-hand binding site
PfamPF006127.1E-5842860IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 981 aa     Download sequence    Send to blast
MAEARRYLPN QQLDLVQILQ EAQHRWLRPT EICEILRNYQ KFRLTPDPPV RPPAGSLFLF  60
DRKALRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEENE SFQRRSYWML  120
DGQLEHIVLV HYREVKEGYK SSISRLLADP GSQVGSPQSS SVPCSAQANS PAPTVQTSNI  180
LSPNRVDWIG PTPCLEFEDV DSGGGPQASS VAHPTFGSVS QNASLLLHGV PGTPLAGVLS  240
LTRNEDGVTD QKVYAEHPFG ADYRAHKLTD ARLDVGGKNQ DVEDRLITGI DIQAVTTASQ  300
GEIQVPQEHA LNSIYPQFQG YSDSQMAVIS TEQVEKESKD VETANEEAGE LKKLDSFGRW  360
MDREIGVDCD DSLMASDSGN YWNALDTEND DKEVSSLSRH MQLEIDSLGP SLSQEQLFSI  420
FDFSPDWTYS GIETKVLIVG RFLGSRRYSA ETKWGCMFGE IEVSAEVLSD NVIRCQTPIH  480
APGRVPFYVT CSNRLACSEV REFEYREKPL GIGINITPEE KSRLQIRLGK LLDLGPEGKR  540
LDCSVVDCDK CKLRSTIYSM TTNSSGDWGL SPNHATPRDV LIQNLLKDRL CEWLVFKVHD  600
GGKGPHVLDD EGQGVIHLAA SLGYEWAMGP IVAAGISPNF RDAHGRTGLH WASYFGREET  660
VIALVRFGAA PGAVDDPTPA FPGGQTAADL ASSSGHKGIA GYLAEADLIS HLSLLNIGEN  720
TMDSAAATIA AENAINTGSR IFTSDLSIEH QFLKGSLAAV RKSAHAAALI QAAFRNRSFR  780
HRQLKSSEDI SDVSLDLVAL GSLNKVQKLS HFEDYLHSAA LRIQRKYRGW KGRREFLKIR  840
NRIVKIQAHV RGHQVRKQYK KLVWSVSILE KVILRWRRKG VGLRGFRVET AIEGVSPGIR  900
KIDEYEFLRI GRKQKVAGVE KALARVKSMV RHPEAREQYM RLVSKFESFK LGHEGSSGTQ  960
QVDNSKKSAT EQVLPAFTED H
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015900131.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015900131.10.0calmodulin-binding transcription activator 2-like
TrEMBLA0A251QVY80.0A0A251QVY8_PRUPE; Uncharacterized protein
STRINGXP_008223475.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF128892526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09410.20.0ethylene induced calmodulin binding protein