PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015899291.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family BES1
Protein Properties Length: 325aa    MW: 34617.5 Da    PI: 8.2927
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015899291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822212.21.3e-6521451150
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gn+klpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++++g+s+ asp+ss +
  XP_015899291.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPAERMDVVGASTVASPCSSFH 96 
                     5899*****************************************************************************************99 PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                             +sp++sy++sp sssfpsp+s++ + + +   +sl+p+l++ls++sss+
  XP_015899291.1  97 --------PSPCASYNPSPGSSSFPSPASSSYVANPNGdsSSLIPWLKNLSSASSSA 145
                     ........*******************99887766544559*********9987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.3E-663139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNF KLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKGCKPAERM DVVGASTVAS PCSSFHPSPC ASYNPSPGSS SFPSPASSSY  120
VANPNGDSSS LIPWLKNLSS ASSSASSSKL PHLYIHSGSI SAPVTPPLSS PTARTPRIKP  180
DWDDQSTRPG FGGQHSSFLP SSTPPSPGRQ IVPDPEWFAG IRLPQGGPTS PTFSLVASNP  240
FGFKDEALAG GGSRMWTPGQ SGTCSPAIAA GSDHTADIPM SEVISDEFAF GSHATGLVKP  300
WEGERIHEEC GSDDLELTLG SSRTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A3e-22676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B3e-22676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C3e-22676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D3e-22676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015899291.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015899291.10.0BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-140BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A067DLE10.0A0A067DLE1_CITSI; Uncharacterized protein
STRINGXP_006477843.10.0(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-119BES1/BZR1 homolog 4