PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_015899172.1

Organism

Ziziphus jujuba

Taxonomic ID

326968

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus

Family

NZZ/SPL

Protein Properties

Length: 429aa MW: 47037.5 Da PI: 8.2346

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_015899172.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	20.2	9.4e-07	26	77	49	98
NOZZLE 49 sktaqqkqkkptlrgmgvaklerfiieeekkkl..vvatvgdtssvaaisnt 98 s + + kqkk rg+gva+le+ ++ee++kk vva+ ss ++ s t XP_015899172.1 26 SSSKKPKQKKVPQRGLGVAQLEKIRLEEQQKKDaaVVAAAAILSSPSSLSPT 77 445567899999***************9988754456666555555554433 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	5.2E-5	27	81	IPR014855	Plant transcription factor NOZZLE

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence Send to blast
MAQDDQTQKC SSSSGGGGGI GSIGRSSSKK PKQKKVPQRG LGVAQLEKIR LEEQQKKDAA 60 VVAAAAILSS PSSLSPTKSS YISLPIPHYH HHSHQSSSSI QFSSLPSVDN SLFRPPLLPA 120 QNIDVRKPNN VPFTNQVANN DGFEIPGHAN VPKLWNPREY SLEKEISSGL DPGFAHRSTL 180 NLPYEPITVW PLNASVRRAQ QHYQPPSMVN VPLSTSSSSS SSSVLSYQME PPSNQSYNGN 240 FTHMWPEEEK IVGMKRPYPF SLDNPPGPPF SIKFPAFVAP MRVDEPASCR NGGSFNLETS 300 NPKLREGPSC STSILESYSK NSIQENGAFS GDFLTLSLPT WTSQSPKFNL PSGHLSFHNC 360 EIPNFATHPF QGSVNDPKTK FQPEPSVPTE QQRFYSFFPP ATPQIGQAET TMHNCHGEVR 420 ENVDLNLKL

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence Send to blast

MAQDDQTQKC SSSSGGGGGI GSIGRSSSKK PKQKKVPQRG LGVAQLEKIR LEEQQKKDAA  60
VVAAAAILSS PSSLSPTKSS YISLPIPHYH HHSHQSSSSI QFSSLPSVDN SLFRPPLLPA  120
QNIDVRKPNN VPFTNQVANN DGFEIPGHAN VPKLWNPREY SLEKEISSGL DPGFAHRSTL  180
NLPYEPITVW PLNASVRRAQ QHYQPPSMVN VPLSTSSSSS SSSVLSYQME PPSNQSYNGN  240
FTHMWPEEEK IVGMKRPYPF SLDNPPGPPF SIKFPAFVAP MRVDEPASCR NGGSFNLETS  300
NPKLREGPSC STSILESYSK NSIQENGAFS GDFLTLSLPT WTSQSPKFNL PSGHLSFHNC  360
EIPNFATHPF QGSVNDPKTK FQPEPSVPTE QQRFYSFFPP ATPQIGQAET TMHNCHGEVR  420
ENVDLNLKL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_015899172.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015899172.1	0.0	uncharacterized protein LOC107432536
TrEMBL	A0A314XZ00	1e-140	A0A314XZ00_PRUYE; Uncharacterized protein
TrEMBL	M5WHS4	1e-140	M5WHS4_PRUPE; Uncharacterized protein
STRING	EMJ12826	1e-141	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8956	12	13