PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015895208.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family YABBY
Protein Properties Length: 81aa    MW: 9069.65 Da    PI: 7.2695
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015895208.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY63.21.1e-191057148
           YABBY  1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsv 48
                    +d+++ se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l  +
  XP_015895208.1 10 MDLVQPSEHLCYVRCNFCNTVLAVGLPCKRLLDTVTVKCGHCSNLSFL 57
                    578999*************************************98544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046903.2E-201564IPR006780YABBY protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007275Biological Processmulticellular organism development
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    Send to blast
MNIDDKVTSM DLVQPSEHLC YVRCNFCNTV LAVGLPCKRL LDTVTVKCGH CSNLSFLSTR  60
PPVQGQCLDH PLSLQVIIIY Y
Functional Description ? help Back to Top
Source Description
UniProtRegulates carpel specification in flower development. Severe or intermediate mutation in DL causes complete or partial homeotic conversion of carpels into stamens without affecting the identities of other floral organs. Interacts antagonistically with class B genes and controls floral meristem determinacy. Regulates midrib formation in leaves probably by inducing cell proliferation in the central region of the leaf. {ECO:0000269|PubMed:14729915}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015895208.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015895208.17e-54protein DROOPING LEAF
SwissprotQ76EJ05e-29YABDL_ORYSJ; Protein DROOPING LEAF
TrEMBLA0A067KYR03e-43A0A067KYR0_JATCU; Uncharacterized protein
STRINGXP_002512055.13e-41(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF102593040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.11e-26YABBY family protein