PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015895011.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 391aa    MW: 44048.6 Da    PI: 4.3488
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015895011.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.3e-194897255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y GVr+++ +grWvAeI+d      ++ r +lg+++taeeAa+a+++a+  l+g
  XP_015895011.1 48 RYVGVRQRP-SGRWVAEIKDtI----QKIRLWLGTYDTAEEAARAYDEAACLLRG 97
                    79*******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.38E-3247104No hitNo description
PfamPF008475.3E-144897IPR001471AP2/ERF domain
SuperFamilySSF541712.75E-1948105IPR016177DNA-binding domain
PROSITE profilePS5103219.95448105IPR001471AP2/ERF domain
SMARTSM003802.9E-3448111IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-2748104IPR001471AP2/ERF domain
PRINTSPR003676.9E-84960IPR001471AP2/ERF domain
PRINTSPR003676.9E-87187IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MVKKRKGSEE EEEKESSTND GNMGWDQVME AASAASAALC ETRRARKRYV GVRQRPSGRW  60
VAEIKDTIQK IRLWLGTYDT AEEAARAYDE AACLLRGANT RTNFWPCSPS PNSRPALPSR  120
IANLLLLRLK ARNNACATMS SSLPTNQVQE QAIQAKDNMF DSFFNVQEYC NVNEDSDNVS  180
NMVSDITTSD YMTESFESNF PGTNDRDHPG ASGTFENDSI SFDDTNHCEG KKEKEEEEED  240
LNTGLVDLRF VDMVESSTYF YPFEIAEEMV DPMDMENSDH HESSILGGTM KRMMYERKFS  300
ASLYAFHGIS ECMKLKLGSE LAEGEERSGQ LSKLQNNSNN EEEKRKEDDI FQEGVQEQIG  360
VLQSPTGIES LSSESGELYL WSKLNLLLSS L
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015895011.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015895011.10.0ethylene-responsive transcription factor RAP2-2-like
TrEMBLA0A2P5G0B51e-137A0A2P5G0B5_TREOI; AP2/ERF transcription factor
STRINGXP_009360645.11e-102(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.18e-19related to AP2 11