PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015894779.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 399aa    MW: 44233.4 Da    PI: 6.8062
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015894779.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.39e-10112154345
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     + k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  XP_015894779.1 112 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 154
                     568899************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.0E-8104157No hitNo description
SMARTSM003389.8E-8110173IPR004827Basic-leucine zipper domain
PfamPF077165.4E-7110156IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415112156IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.75E-7114157No hitNo description
CDDcd147084.43E-21114166No hitNo description
PROSITE patternPS000360117132IPR004827Basic-leucine zipper domain
PfamPF141446.5E-33196271IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MTCVDAADTV LNSAGESGQA GPSNPFNLGT PYKPQSVVSI ESQSLKSPKG QLSNLVSGDT  60
ENWEESSMAD ASPRTDISTD VDTDDKNQRF DRNQYAIQVA SDSSDRSKDK SDQKTLRRLA  120
QNREAARKSR LRKKAYVQQL ESSRLKLTQL EQELQRARQQ GIFISSSGDQ AHSMSGNGAM  180
AFDVEYARWL EEQNRQINEL RSAVNSHASD TELRIIVDGI LAHYEEIFRL KGVAAKADVF  240
HLLSGMWKTP AERCFLWLGG FRSSELLKLL VNQLEPLTEQ QLVGITNLQQ SSQQAEDALS  300
QGMEALQQSL AETLSSGSLG SSGSSGNVAN YMGQMAMAMG KLGTLEGFIR QADNLRQQTL  360
QQMHRILTTR QSARALLAIH DYFSRLRALS SLWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015894779.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024934309.10.0transcription factor TGA2.2-like isoform X1
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2I4GZU50.0A0A2I4GZU5_JUGRE; transcription factor TGA2-like isoform X2
STRINGXP_006465757.10.0(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-159TGACG motif-binding factor 6