PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015894460.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 447aa    MW: 48622.5 Da    PI: 7.7761
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015894460.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.9e-1862111255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  XP_015894460.1  62 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDYAARSMRG 111
                     59*******.**********93....35999**********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003809.9E-3362127IPR001471AP2/ERF domain
PROSITE profilePS5103222.24762119IPR001471AP2/ERF domain
PfamPF008473.7E-1162111IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-2162119IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.3E-2962118IPR001471AP2/ERF domain
CDDcd000185.08E-2962118No hitNo description
PRINTSPR003672.8E-96374IPR001471AP2/ERF domain
PRINTSPR003672.8E-985101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009735Biological Processresponse to cytokinin
GO:0009880Biological Processembryonic pattern specification
GO:0010084Biological Processspecification of organ axis polarity
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MEEAFRRING QTHSSEPDII SDQQQKKCIN NTAMNNNKRP LQRESSTGGG GSAAGGGGGT  60
MRYRGVRRRP WGRYAAEIRD PQSKERRWLG TFDTAEEAAC AYDYAARSMR GLKARTNFVY  120
PPSPPPSSAA AAAPPDHQHH HYHHHHPLPQ AFSFPKQSQP KNQTSRSFNP GSKSSFSSHH  180
PQAVCDNSSS SSSINMLFLR DFVSPSNPCL VSPQAFYNQF PHFNGSSSSS SSSSSLYSTN  240
PPNSVSACCL GNPTTCMNMP SSLVDHSSSS YDKTITSASA TAGGAADEFE FDFFPKESSD  300
SGLLEEVIHR FFPKPSSKKC GTQKAKAKDN DKESLPVSCS SGMSATTQCS SYDSSMRMMT  360
GIKNDHMAAG HYHCFDNNIN NHGVLQPLGY GYGNGNFNGA LDVSHGIPFN SSEVPMSLQL  420
GQDSVVLDEI FQYPEFINAF VARMQNA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-2050118471Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015894460.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015894460.10.0ethylene-responsive transcription factor ESR1-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41003256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.18e-14DORNROSCHEN-like