PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015892467.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | bZIP | ||||||||
Protein Properties | Length: 589aa MW: 64322.8 Da PI: 6.8116 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.5 | 3.9e-10 | 429 | 486 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l+ + l+++ XP_015892467.1 429 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQ 486 9********************************************9998877666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.2E-18 | 425 | 489 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.737 | 427 | 490 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.38E-11 | 429 | 480 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-10 | 429 | 485 | No hit | No description |
Pfam | PF00170 | 8.1E-9 | 429 | 483 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 4.93E-24 | 430 | 479 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 589 aa Download sequence Send to blast |
MGDTEESRGG DMMQRLHSSF GTSSSSFLKQ PLAMDQLNIP QFNHSQIRSR HFQQQQSFAS 60 GDTTKRVGIP PSHPHQIPPI SPYSQIPVSR PVNQQMGSQN FSPGPTHSRS LSQPSFFSLD 120 SLPPLSPSPF RDSPSTSISD QLSADVSMED RDASSHSLLP PSSPFAKGTS PRVGESLPPR 180 KAHRRSNSDI PFGFSTVMQQ ASQPFIPLRS CGGLERSVSG RENSGVAKPA QLVKKETSWD 240 TGGDNNAEGM GERKSEGEVV DDLFSAYMNL ESIDALNSSG TDDKNGNENR EDLDSRASGT 300 KTNGGDSSDN EAESSVNEST SSMQRMGLNS STEKREGIKR SAGGDIAPTS RHYRSVSMDS 360 FMDKLNFDES PKLPPSPGTR SGQLSPSNTI DGNSNTFSLE FGNGEFSGAE LKKIMANDKL 420 AEIALTDPKR AKRILANRQS AARSKERKMR YISELEHKVQ TLQTEATTLS AQLTLLQRDS 480 VGLTNQNNEL KFRLQAMEQQ AQLRDALNEA LTAEVQRLKL ATAELGSDSH PSKRMVSPLS 540 VGPQMFSLQQ QQQPPSQFNI PHQQQQQQQQ ASQPQQQNGS STSKPESNQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015892467.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024932974.1 | 0.0 | 1-phosphatidylinositol 3-phosphate 5-kinase | ||||
TrEMBL | A0A2N9G6H5 | 0.0 | A0A2N9G6H5_FAGSY; Uncharacterized protein | ||||
STRING | XP_006471421.1 | 0.0 | (Citrus sinensis) | ||||
STRING | XP_006487269.1 | 0.0 | (Citrus sinensis) | ||||
STRING | XP_006493636.1 | 0.0 | (Citrus sinensis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2272 | 34 | 84 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 1e-143 | bZIP family protein |