PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015891869.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 325aa    MW: 36432.3 Da    PI: 5.3134
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015891869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.8e-1877125355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+W+AeIrdp++     r++lg+f tae+Aa+a+++ ++k++g
  XP_015891869.1  77 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEDAARAYDREARKIRG 125
                     9*******.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.64E-2276134IPR016177DNA-binding domain
PROSITE profilePS5103223.60476133IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-3276134IPR001471AP2/ERF domain
SMARTSM003803.5E-3876139IPR001471AP2/ERF domain
PRINTSPR003671.6E-117788IPR001471AP2/ERF domain
CDDcd000183.99E-3377134No hitNo description
PfamPF008474.2E-1177125IPR001471AP2/ERF domain
PRINTSPR003671.6E-1199115IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MCGGAIIADF IPRNRGRRVT SNDIWPNSSF AKLNNGIFDP FVSPFNHDDS AFPKRSMPSS  60
EGAKTEKPAK RQRKNLYRGI RQRPWGKWAA EIRDPRKGVR VWLGTFNTAE DAARAYDREA  120
RKIRGKKAKV NFPNEDDNYV IRKSQPNQTH FRNPNPSLYP PPRKANFNSS FSEGLDFGFG  180
YDLNQTGTFP CSNGFNSMEG VNPTMPMVMS GDENSGSVSE DGYASTGLLG GGQTANNGCY  240
TETKVKEEEV KPTKLEITEE NQVENEVQKL SEELMAYENY MKFYQIPYLD GQSLAPNPTQ  300
QESLVGDLWS FDDDDVPSSD NSTAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-2277133360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015891869.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015891869.10.0ethylene-responsive transcription factor ERF071
TrEMBLA0A2P5BJG71e-131A0A2P5BJG7_TREOI; AP2/ERF transcription factor
STRINGEMJ016171e-125(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67713449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.14e-35ethylene-responsive element binding protein