PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015890917.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family EIL
Protein Properties Length: 458aa    MW: 52397.4 Da    PI: 5.1364
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015890917.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3391.51.1e-119253441353
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     ++lkkrmwkd++ll++lk++  +++ed e+ +      + ++++rrkkm+raQD+iLkYM+k+mevc+a+GfvYgi+pekgk v g+s+sLr+WW
  XP_015890917.1  25 DDLKKRMWKDRVLLQKLKKK--SKIEDPEP-L------TKQDASRRKKMARAQDSILKYMVKIMEVCKAKGFVYGIVPEKGKAVGGSSESLREWW 110
                     79*************66655..55788888.3......34799**************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS
            EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190
                     k+kv+fd+n+p a+++  +   ++++ ++ ++ + s  h l++lqDTtlgSLLsal qhc ppqrrfplekg++pPWWP+Gkelwwge+g+s+++
  XP_015890917.1 111 KDKVRFDQNAPPALTEVLP---VVEQLEEGEICPVSCMHLLHDLQDTTLGSLLSALLQHCAPPQRRFPLEKGLAPPWWPNGKELWWGEQGVSHEH 202
                     ***************9944...5555555567799************************************************************ PP

                     -.-----GGG--HHHHHHHHHHHHHHTGG.GHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3 191 gtppykkphdlkkawkvsvLtavikhmsp.tieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedv 284
                     g+ppykkphdlkkawkvsvLtavikhms  ++e++r+l+rqsk+lqdkm+ak+ +++++v+n ee ++             ++++++s++++   
  XP_015890917.1 203 GPPPYKKPHDLKKAWKVSVLTAVIKHMSTdNMERMRRLVRQSKCLQDKMTAKDIATWSKVVNTEETLLL----------LTEKSLKISEGDE--G 285
                     ***************************8625789******************************98762..........3566788888855..5 PP

                     XXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
            EIN3 285 egkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                     +gk+e+  +     +  ++  v++krk +  ++++v      + cq+  f++se +l+f dkns++++e
  XP_015890917.1 286 DGKEEEG-E-----N-PSNSIVNEKRK-NMFDREAVDVP--LYACQNTMFPQSELALGFLDKNSRTNHE 344
                     5555555.1.....2.23456677777.77788888766..7*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.4E-11125267No hitNo description
Gene3DG3DSA:1.10.3180.103.2E-65143271IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.09E-55145269IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MVKFHEDLNN PEEEEEDVGE EISYDDLKKR MWKDRVLLQK LKKKSKIEDP EPLTKQDASR  60
RKKMARAQDS ILKYMVKIME VCKAKGFVYG IVPEKGKAVG GSSESLREWW KDKVRFDQNA  120
PPALTEVLPV VEQLEEGEIC PVSCMHLLHD LQDTTLGSLL SALLQHCAPP QRRFPLEKGL  180
APPWWPNGKE LWWGEQGVSH EHGPPPYKKP HDLKKAWKVS VLTAVIKHMS TDNMERMRRL  240
VRQSKCLQDK MTAKDIATWS KVVNTEETLL LLTEKSLKIS EGDEGDGKEE EGENPSNSIV  300
NEKRKNMFDR EAVDVPLYAC QNTMFPQSEL ALGFLDKNSR TNHELLCAYR GDKNIDPSSN  360
TQMKSVTDWM NMELPKVNQD GVVAVTNVDG DEEHSCNVLA DYSSWGNTIE DLAMNAVFEM  420
PKENMDLEDN PVLHQHISND QQQTTSIWDL GFHWPYQA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-591432691126Protein ETHYLENE INSENSITIVE 3
4zds_B5e-591432691126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14162KKKSKIEDPEPLTKQDASRRKK
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015890917.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015890917.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-133EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A2C9US901e-167A0A2C9US90_MANES; Uncharacterized protein
STRINGXP_002533137.11e-166(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-128EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]