PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015890916.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family EIL
Protein Properties Length: 394aa    MW: 44618.6 Da    PI: 4.8256
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015890916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3356.93.8e-109128049353
                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHH CS
            EIN3  49 msraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTt 143
                     m+raQD++LkYM+k+mevc+a+GfvYgiipekgk v g+s+sLr+WWk+kv+fd+n+p a+++  ++   l++++   + + s  h l++lqDTt
  XP_015890916.1   1 MARAQDSVLKYMVKIMEVCKAKGFVYGIIPEKGKAVGGSSESLREWWKDKVRFDLNAPFALTEVLPALEQLEEGE---ICPISCMHLLHDLQDTT 92 
                     89************************************************************9955433344444...45889************ PP

                     HHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGG.HHHHHHTTTTSSSSTTT CS
            EIN3 144 lgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmspt.ieeirelerqskylqdk 237
                     lgSLLsal qhc ppqrrfplekg++pPWWP+G+elwwge+g+s+++g+ppykkphdlkkawkvsvLtavikhms + +e +r+l+rqsk+lqdk
  XP_015890916.1  93 LGSLLSALLQHCAPPQRRFPLEKGLAPPWWPNGQELWWGEQGVSHEHGPPPYKKPHDLKKAWKVSVLTAVIKHMSTDnMETMRRLVRQSKCLQDK 187
                     **************************************************************************8751678************** PP

                     --SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXX CS
            EIN3 238 msakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqss 332
                     m+ak+  ++++v+n ee+++          r  ++ +++s++++   +gk+e + +        + + v++krk +  ++++v      + cq+ 
  XP_015890916.1 188 MTAKDITTWSKVVNTEEALL----------RLTEKCLIISEGDE--GDGKEEGENS--------SYLIVNEKRK-NMFDREAVDVP--LYACQNT 259
                     *****************976..........44666777777755..4555555522........2355566666.78888888766..7****** PP

                     XXXX.XXXXXXXXXXXXXXXX CS
            EIN3 333 qfrgsetelifadknsisqne 353
                      +++se +l+f dkns++++e
  XP_015890916.1 260 MCPQSELALGFLDKNSRTNHE 280
                     *******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.3E-1021204No hitNo description
Gene3DG3DSA:1.10.3180.103.8E-6580208IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.79E-5582207IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MARAQDSVLK YMVKIMEVCK AKGFVYGIIP EKGKAVGGSS ESLREWWKDK VRFDLNAPFA  60
LTEVLPALEQ LEEGEICPIS CMHLLHDLQD TTLGSLLSAL LQHCAPPQRR FPLEKGLAPP  120
WWPNGQELWW GEQGVSHEHG PPPYKKPHDL KKAWKVSVLT AVIKHMSTDN METMRRLVRQ  180
SKCLQDKMTA KDITTWSKVV NTEEALLRLT EKCLIISEGD EGDGKEEGEN SSYLIVNEKR  240
KNMFDREAVD VPLYACQNTM CPQSELALGF LDKNSRTNHE LLCAYRGDKD IDPSSNTQMK  300
SVTDWMNMEL AKVNQDGDVA VTNVDGDEEQ SCNILAHYSS WGNSIEDLAM DAVFEMPKEN  360
MDLEDNPVSH QHISNDQQQT TSIWDLGFHW PNQA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A7e-59802081128Protein ETHYLENE INSENSITIVE 3
4zds_B7e-59802081128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015890916.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015890916.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-116EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A1R3GD611e-155A0A1R3GD61_COCAP; Uncharacterized protein
STRINGGorai.003G043500.11e-149(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-116EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]