PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015890402.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 202aa    MW: 23269.2 Da    PI: 10.4363
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015890402.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.93.4e-11103147549
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                     +r rr+++NRe+ArrsR RK++ +e+L+  v  +  eN++L ++l
  XP_015890402.1 103 RRRRRMISNRESARRSRMRKQKHLENLRSQVNRFRVENRELTNRL 147
                     799************************************998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.4E-1097147No hitNo description
SMARTSM003383.7E-1399163IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.496101147IPR004827Basic-leucine zipper domain
PfamPF001701.1E-8103147IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-10103149No hitNo description
PROSITE patternPS000360106121IPR004827Basic-leucine zipper domain
CDDcd147026.74E-18108151No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MLSAYPAILP SSDQILGNPF PAFDGGFTPW DFSEVFPPVD HEGSPKPVTS NSGSGDFQTT  60
SSSPKAVVSG SGSDEPNRYH GKIKTTCCTD EPSNRPVSVV DERRRRRMIS NRESARRSRM  120
RKQKHLENLR SQVNRFRVEN RELTNRLRFA LYHFQRVHTD NIRLRSEYSM LQQKLSDIRQ  180
IMLFRQLQHF PASWPCNTVI SE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102123RRRRRMISNRESARRSRMRKQK
2115122RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015890402.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015890402.11e-150light-inducible protein CPRF2
TrEMBLW9SJV08e-82W9SJV0_9ROSA; Ocs element-binding factor 1
STRINGXP_010106904.11e-82(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.27e-30basic leucine-zipper 6