PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015889752.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | bZIP | ||||||||
Protein Properties | Length: 265aa MW: 29175.5 Da PI: 9.5209 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.6 | 1.8e-15 | 195 | 245 | 4 | 54 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 ++r +r++kNRe+A rsR+RK+a++ eLe +v+ L +eN +Lk + e++ + XP_015889752.1 195 DRRHKRMIKNRESAARSRARKQAYTNELELEVAHLLEENARLKRQQEQYCQ 245 689***************************************987776644 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.7E-13 | 192 | 253 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.0E-13 | 193 | 243 | No hit | No description |
PROSITE profile | PS50217 | 10.703 | 194 | 243 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.9E-12 | 196 | 243 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 6.33E-31 | 196 | 250 | No hit | No description |
SuperFamily | SSF57959 | 1.44E-11 | 196 | 245 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 199 | 214 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence Send to blast |
MLSSTGGEKT HHSKTNKCLS PTLFSSLRPT PQRTMEEVWK DINLCSLPET GPAIRLYNTS 60 NGNPNHPSSS SDFRNMILQD FLARPFANNN NNNKPPPPPP TTTVDVSTAT TNETTLYTAL 120 PPPATALSLN SGPDHFHFLD NSGHPALATS DSCNLHANSN NSNVSSFSCP FEALAASSPS 180 FGKKRFPELE SGSGDRRHKR MIKNRESAAR SRARKQAYTN ELELEVAHLL EENARLKRQQ 240 EQYCQAATAQ LPKKKTLQRT STAPF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015889752.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015889752.1 | 0.0 | protein FD | ||||
Swissprot | Q84JK2 | 1e-64 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A2I4FD69 | 2e-75 | A0A2I4FD69_JUGRE; protein FD isoform X2 | ||||
STRING | EOX90780 | 8e-68 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3755 | 32 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 1e-33 | bZIP family protein |