PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_015888152.1

Organism

Ziziphus jujuba

Taxonomic ID

326968

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus

Family

Dof

Protein Properties

Length: 314aa MW: 34719.3 Da PI: 9.5783

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_015888152.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	112.3	2.3e-35	49	108	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++alkcprC+s+ntkfCyynny+ sqPr+fC++C+r+WtkGG+lrnvPvGggr+ ++ + XP_015888152.1 49 QSEALKCPRCESSNTKFCYYNNYNKSQPRHFCRTCKRHWTKGGTLRNVPVGGGRKIKRPK 108 67899************************************************9877755 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	3.4E-31	51	104	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-22	52	106	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.083	53	107	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	55	91	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence Send to blast
MGLSSKQVIS SDGLDWSRTF LQAQTNLQLP KSTSMRRQQQ QQQNQLQQQS EALKCPRCES 60 SNTKFCYYNN YNKSQPRHFC RTCKRHWTKG GTLRNVPVGG GRKIKRPKKS GSGTAATTSA 120 TATTTTTATA TTTSAAATGN SNTNGNRLST HLTFQGHEQQ RQSSVSLALG DEKNNVSEIF 180 YQALIRPPSL PQQNLIGSNS NINRSFLLSN LPSSQDQQSL NFPLISNSAS LDPKNSSIST 240 SFPTSNNVYN YVDHQDFKLM SEPSITGSTT QPWQIVTTTT SSGMDMSNYW NWEDIDNLVS 300 ADLNVPWDDS DIKP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_015888152.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015888152.1	0.0	dof zinc finger protein DOF1.4-like
TrEMBL	A0A2I4DJI3	4e-86	A0A2I4DJI3_JUGRE; dof zinc finger protein DOF1.4-like
TrEMBL	A0A371HJE5	5e-86	A0A371HJE5_MUCPR; Dof zinc finger protein DOF1.4 (Fragment)
STRING	XP_007159297.1	2e-86	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5107	33	56

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	3e-28	DOF zinc finger protein 1