PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015886437.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 313aa    MW: 33877 Da    PI: 9.7107
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015886437.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.85.4e-14231290361
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklks 61 
                     + +r+rr++kNRe+A rsR+RK+a++ eLe  +  Le+eN++L k+++e+ k+  ++l  
  XP_015886437.1 231 AQQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENERLmKEKAERTKERFKQLME 290
                     679***************************************835567888887777755 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.8E-12225289No hitNo description
SMARTSM003386.8E-10229293IPR004827Basic-leucine zipper domain
PfamPF001705.9E-12231289IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.909231283IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-9233284No hitNo description
CDDcd147076.21E-17233279No hitNo description
PROSITE patternPS000360236251IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MASSKVMASS NSRNSDLARR SSSSLSSSVA TKPKADQNQK NNNSNRTTTK ASSLGSMTVD  60
GLLRNVYDAN PTTESTLLDA QITLIDTPPI ATAAAGAGDM NSGGSVSSSN GPKTVDDVWR  120
EIVSGDRKGC KEEAPDEMMT LEDFLARAGA VEEDDVKSLP PPATERLSGG LFSFDSIPPS  180
PLQALDKVDG SIIGFGNGVE VIGGGGTGTG TAGGVRGKRG RAVLEPLDKA AQQRQRRMIK  240
NRESAARSRE RKQAYQVELE SLAVRLEEEN ERLMKEKAER TKERFKQLME KIIPVEEKRR  300
APRVLRRVHS FEW
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015886437.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015886437.10.0G-box-binding factor 4-like
SwissprotP427774e-62GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A2I4GW961e-126A0A2I4GW96_JUGRE; G-box-binding factor 4 isoform X1
STRINGevm.model.supercontig_21.2071e-124(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.14e-60bZIP family protein