PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015886022.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 184aa    MW: 20247.5 Da    PI: 4.7641
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015886022.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.4e-191566156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    s y+GVr +k +g+Wv+eIr+p   gk+ r++lg+f+t+e+Aa a++ a++ ++g+
  XP_015886022.1 15 SSYRGVRKRK-WGKWVSEIREP---GKKNRIWLGSFDTPEMAATAYDVAALHFRGH 66
                    67*****999.**********8...5579**********************99996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.33E-231574IPR016177DNA-binding domain
PfamPF008471.1E-121566IPR001471AP2/ERF domain
PROSITE profilePS5103223.8411673IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-321674IPR001471AP2/ERF domain
SMARTSM003803.8E-391679IPR001471AP2/ERF domain
CDDcd000182.04E-311773No hitNo description
PRINTSPR003676.3E-101728IPR001471AP2/ERF domain
PRINTSPR003676.3E-103955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MGEPNTSSSL GSASSSYRGV RKRKWGKWVS EIREPGKKNR IWLGSFDTPE MAATAYDVAA  60
LHFRGHDARL NFPQLANSLP QPLSSNAEDI RKAAHEGALR LRLSSTPAAA EPDCGSSSGS  120
NVAPVTVRLS PSQIQAINES PLDSPKMWMQ MAEALMVEES TMFSNEVNEE NEWEDVQNES  180
LWDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-171778668ATERF1
3gcc_A3e-171778668ATERF1
5wx9_A1e-16977776Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015886022.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015886022.11e-133ethylene-responsive transcription factor ERF021
SwissprotQ9C9I26e-65ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A314UBH21e-83A0A314UBH2_PRUYE; Ethylene-responsive transcription factor ERF021-like
STRINGGorai.005G116500.14e-84(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.11e-60ERF family protein