PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015885739.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | NAC | ||||||||
Protein Properties | Length: 298aa MW: 33873.5 Da PI: 8.1015 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 169.4 | 1.1e-52 | 8 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv++yL++k++++++ + +i+evd+yk++Pw+Lp ++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + XP_015885739.1 8 LPPGFRFHPTDEELVSHYLCRKCASQPIAV-PIIAEVDLYKYDPWELPGMALYGEKEWYFFSPRDRKYPNGSRPNRAAGAGYWKATGADKPIGH- 100 79**************************99.88***************6666689*************************************99. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + vg+kk Lvfy g+ap+gekt+W+mheyrl XP_015885739.1 101 -PKPVGIKKALVFYAGKAPRGEKTNWIMHEYRL 132 .789***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.18E-63 | 5 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 61.115 | 8 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.1E-28 | 9 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009611 | Biological Process | response to wounding | ||||
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence Send to blast |
MTAADLQLPP GFRFHPTDEE LVSHYLCRKC ASQPIAVPII AEVDLYKYDP WELPGMALYG 60 EKEWYFFSPR DRKYPNGSRP NRAAGAGYWK ATGADKPIGH PKPVGIKKAL VFYAGKAPRG 120 EKTNWIMHEY RLADVDRSAR KKNSLRLDDW VLCRIYNKKG TIEKQQYQSG SNRKTSCLEE 180 PVDKKPVILT QGRNAIPPPA ATTSVTPVPT GMNDYIYFDT SESIPRLHTD SSCSEHVVSP 240 EFTCEVQSEP KWKEWEKALD FPFNYGDAMI DNGFGSQFQG SNQMSPLQDM FMYLPKPF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-81 | 4 | 164 | 11 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00121 | DAP | Transfer from AT1G01720 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015885739.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015885739.1 | 0.0 | NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 1e-148 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | W9R9L0 | 1e-176 | W9R9L0_9ROSA; NAC domain-containing protein 2 | ||||
STRING | XP_010095416.1 | 1e-177 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1258 | 34 | 108 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-146 | NAC family protein |