PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015883792.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family NF-X1
Protein Properties Length: 1150aa    MW: 125177 Da    PI: 8.0388
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015883792.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X118.83.6e-06402419118
        zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                     CG+H C+++CH+GpC++C
  XP_015883792.1 402 CGNHVCGEICHPGPCGEC 419
                     ****************** PP
2zf-NF-X122.13.3e-07460477118
        zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                     CG+H C++ CH G+CppC
  XP_015883792.1 460 CGMHHCEEVCHDGDCPPC 477
                     ****************** PP
3zf-NF-X119.32.4e-06555573119
        zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                     CG+H+C++lCH+G CppC 
  XP_015883792.1 555 CGQHSCESLCHTGHCPPCL 573
                     ******************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF578502.12E-7160230No hitNo description
PROSITE profilePS500168.6168229IPR019787Zinc finger, PHD-finger
PROSITE patternPS013590171226IPR019786Zinc finger, PHD-type, conserved site
PROSITE profilePS500899.421171227IPR001841Zinc finger, RING-type
CDDcd060083.10E-6260321No hitNo description
SMARTSM004380.12283301IPR000967Zinc finger, NF-X1-type
PfamPF0142212285300IPR000967Zinc finger, NF-X1-type
CDDcd060083.71E-11328376No hitNo description
SMARTSM004380.016338357IPR000967Zinc finger, NF-X1-type
PfamPF014220.0046340355IPR000967Zinc finger, NF-X1-type
CDDcd060084.40E-10392434No hitNo description
SMARTSM004384.8E-4402421IPR000967Zinc finger, NF-X1-type
PfamPF014220.005402419IPR000967Zinc finger, NF-X1-type
CDDcd060085.95E-13450498No hitNo description
SMARTSM004383.5E-5460479IPR000967Zinc finger, NF-X1-type
PfamPF014225.9E-6460477IPR000967Zinc finger, NF-X1-type
SMARTSM00438280517551IPR000967Zinc finger, NF-X1-type
PfamPF0142219517528IPR000967Zinc finger, NF-X1-type
CDDcd060085.70E-9545588No hitNo description
SMARTSM004387.7E-4555574IPR000967Zinc finger, NF-X1-type
PfamPF014222.0E-4555572IPR000967Zinc finger, NF-X1-type
CDDcd060086.75E-6602650No hitNo description
SMARTSM004380.036612630IPR000967Zinc finger, NF-X1-type
PfamPF014223.7612629IPR000967Zinc finger, NF-X1-type
SMARTSM004389.6665695IPR000967Zinc finger, NF-X1-type
PfamPF014220.42665680IPR000967Zinc finger, NF-X1-type
CDDcd060081.18E-4693742No hitNo description
PfamPF0142238697723IPR000967Zinc finger, NF-X1-type
SMARTSM004380.25704725IPR000967Zinc finger, NF-X1-type
Gene3DG3DSA:3.30.70.3301.0E-5939994IPR012677Nucleotide-binding alpha-beta plait domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009642Biological Processresponse to light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009697Biological Processsalicylic acid biosynthetic process
GO:0010188Biological Processresponse to microbial phytotoxin
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0000166Molecular Functionnucleotide binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 1150 aa     Download sequence    Send to blast
MSSQVRNERR DRPRIPTHTA RREWVPRGSS TATVVNQPSN LNSDSSESGS QQSSLYSTSN  60
ENGSQRSSSN SNPNGNGNQS SSFNSNPNGN VRDSNFNSPP YEGRYRGNHS SRGHVSRPAN  120
QRRERERSEN QEVRGLKERN INQGGRGLRD SNLPQLVQEI QEKLMKGTVE CMICYDMVRR  180
SAPVWSCSSC FSIFHLNCIK KWARAPTSVD LSAEKSQGFN WRCPGCQFVQ LTSSKEIRYV  240
CFCGKRPDPP SDLYLTPHSC GEPCGKPLEK DVPCAGGSKE DLCPHVCVMQ CHPGPCPPCK  300
AFAPPRICPC GKKVITTRCS DRKSVLTCGQ RCDKLLECWR HRCERICHVG PCDPCHVLVN  360
ASCFCKKNME EVLCGDMAVK GEVKAEDGVF SCGSICGQKL SCGNHVCGEI CHPGPCGECD  420
LMPSRIKTCH CGKTMLREER KSCLDPIPTC SQKCGRSLPC GMHHCEEVCH DGDCPPCLIK  480
VTQKCRCSST SRTVECYRTT TGDKFTCDKP CGWKKSCGRH RCSERCCPLS NSSNIVSGDW  540
DPHFCSMPCG KKLRCGQHSC ESLCHTGHCP PCLETIFTDL TCACGRTSIP PPLPCGTPPP  600
SCQLPCSVPQ PCGHSSSHSC HFGDCPPCSV PVAKECIGGH VVLRNIPCGS KDIRCNKLCG  660
KTRQCGMHAC GRTCHPPPCD SSMGCEPGVK SSCGQTCGAP RRDCRHTCTA PCHPSALCPD  720
VRCDFPVTIS CSCGRITATV PCDAGGSSSS FSADTVYDVS IAQKLPVRLQ PVEATGKKIP  780
LGQRKLICDD ECAKMERKRV LADAFDITPP NLDALHFGEN SVVSELLADL FRRDPKWVIS  840
VEERCKYLVL GKSKGTTSGL KVHVFCPMLK DKRDAVRVIA ERWKLTVSAA GWEPKRFIVV  900
HVTPKSKAPP RVLGVKGTTT VSAPHPPAFD PLVDMDPRLV VSFPDLPRDA DISALVLRFG  960
GECELVWLND KNALAVFHDP ARAATAMRRL DHGTLYHGAI MVHPTAGVYG ASSGTNAWGG  1020
AGISKEGGAA LKGNPWKKAV VHESAWKEDS WGEEEWSGGS VDMQSSVWKK EAPLATSLNR  1080
WNVLDSETAL SSSSTSVRIK DSGKQAAGGP SSSSEDTKDL NSVAQHGKII TMTENSEVVD  1140
DWEDAYDNIT
Functional Description ? help Back to Top
Source Description
UniProtMediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi). {ECO:0000250, ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015883792.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON). {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015883792.10.0NF-X1-type zinc finger protein NFXL1-like
SwissprotQ9SY590.0NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
TrEMBLA0A2I4DI790.0A0A2I4DI79_JUGRE; Potassium transporter
STRINGXP_009360168.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF69723145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10170.10.0NF-X-like 1