PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015880016.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 307aa    MW: 34072.5 Da    PI: 4.3446
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015880016.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.67.4e-10146188446
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                     +k+  r  +NR AA rsR+RKk +++ Le k+k Le+e ++L 
  XP_015880016.1 146 SKKRTRQLRNRDAAVRSRERKKVYVKDLEMKSKYLEGECRRLG 188
                     58899*********************************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.5E-11142205No hitNo description
SMARTSM003380.0028142207IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.243145187IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.56E-10147203No hitNo description
PfamPF001701.3E-7147188IPR004827Basic-leucine zipper domain
CDDcd147042.34E-14148199No hitNo description
PROSITE patternPS000360151165IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MEEELEFLEA DDVIDWSSLL DELPEGANTL DWETEAPILN DSSSSSSSSS SSLPLAAAAT  60
DSPSNHSPDP ISSWIGQIET LLMKEDDADD ANKVASEPPA NDFLADILVD SPAPAQPSDD  120
HDLGLSTDKE ELEVAPVQND SEDLLSKKRT RQLRNRDAAV RSRERKKVYV KDLEMKSKYL  180
EGECRRLGRL LQCCYAENQA LRFSLQMGNS FGSPTTKQES AVLLLESLLL GSLLWLVVIM  240
GLFILTVMPL RNLEPLQLED EGKKALEREA PKGGETKIFG YFVVGSFVKS RRCKASWTKM  300
KQCFLVL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015880016.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015880016.10.0bZIP transcription factor 60
TrEMBLA0A2I4GGP01e-76A0A2I4GGP0_JUGRE; bZIP transcription factor 60-like
STRINGXP_004300086.11e-68(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120093032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.11e-14basic region/leucine zipper motif 60