PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015879808.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 420aa    MW: 45848.4 Da    PI: 4.5134
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015879808.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.9e-194998255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  XP_015879808.1 49 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 98
                    789******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.18E-3248105No hitNo description
SMARTSM003808.9E-3649112IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-1949106IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.3E-2749105IPR001471AP2/ERF domain
PfamPF008471.1E-134998IPR001471AP2/ERF domain
PROSITE profilePS5103219.55949106IPR001471AP2/ERF domain
PRINTSPR003676.3E-85061IPR001471AP2/ERF domain
PRINTSPR003676.3E-87288IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MARKRKAGEQ GLVEDKNCSN EGNIGNWNEM VKEAAAAAAL GGARRARKRF VGVRQRPSGR  60
WVAEIKDTIQ KIRVWLGTFD TAEEAARAYD EAACLLRGAN TRTNFWPCSP SSSSSPALPS  120
KITNLLLQRL KARNNSAAAN VAAASSSSSS FSSLASNHQQ KQHSEEEEDA DFTQFTDFLN  180
DPEDYTPSNN NTMNISQTTI DYMTSSFESC LNGKEEGVHM DSGPSDGGQS SSGEGINSGA  240
EEDGEEEEEE GNGDVGLLDF QFVDDVGSSC YYSPFEIAEE IVEPVEPADS YYGDEPSMLR  300
EAMKRMKYER KFSASLYAFN GIPECLKLKL EGGRNVKGRG RRSEQLTSLQ KACCKKNEKE  360
MAKQECVQVM GKKEEEKPEC SNEMGSSSSS SSSSSSSNLS NDGELLLWSS LDLPPICSVN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-12491051471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015879808.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015879808.10.0ethylene-responsive transcription factor ESR1-like
TrEMBLA0A2C9WDA31e-158A0A2C9WDA3_MANES; Uncharacterized protein
STRINGcassava4.1_008867m1e-159(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-21related to AP2 11