PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015879019.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family NAC
Protein Properties Length: 394aa    MW: 43787.9 Da    PI: 5.963
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015879019.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.73.6e-30561971128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tks 80 
                     lp+G++F+P+d +l+ e+L++k+ + +      ++++   ++  +iy  +P++Lp  +k++ ++++fF++  ++yatg+rk+r+        +++
  XP_015879019.1  56 LPAGVKFDPSDAQLL-EHLAAKCGAGNlsphmfIDEFIPtLEGEGIYCDHPENLP-GAKKDGSSVHFFHRIINAYATGQRKRRKihnqhsvtAEH 148
                     799************.99****99999776644333233366668**********.55677899*******************878888886669 PP

             NAM  81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      +W++tgk+k+v++ +g ++g+kk++v+y  +++ +k+ k++W+mh+y+l
  XP_015879019.1 149 VRWHKTGKTKAVVE-SGIQKGCKKIMVLYksSKKGSKPDKANWIMHQYHL 197
                     99***********9.999***********4434666778*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.53E-3440216IPR003441NAC domain
PROSITE profilePS5100530.12956216IPR003441NAC domain
PfamPF023658.6E-1357197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MARSTWLINS KAIAKKVKNA SRSSAYQIND YGANRECPKC HCHIDNSDVS SEWPGLPAGV  60
KFDPSDAQLL EHLAAKCGAG NLSPHMFIDE FIPTLEGEGI YCDHPENLPG AKKDGSSVHF  120
FHRIINAYAT GQRKRRKIHN QHSVTAEHVR WHKTGKTKAV VESGIQKGCK KIMVLYKSSK  180
KGSKPDKANW IMHQYHLGAE EDEKEGEYVV SKIFYQQQKQ TDKDDKSPLI EDSEIVALHT  240
SPRTPNTNPP IPPRHGKSIF CDDVIDDNKL QASAKEAGPT QGTSHAPQPD IAKDDMGYPE  300
WLAGESQAVE NSDINCLDET LLCKEIFDSG LNYMSDADFA SGTNDLPKNG NASYGIADLE  360
NLELDTPPDF QLSDLQFSSQ ESILGWLDNF EKKF
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015879019.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015879019.10.0SUPPRESSOR OF GAMMA RESPONSE 1 isoform X1
TrEMBLA0A2P5BFR00.0A0A2P5BFR0_TREOI; NAC domain containing protein
STRINGXP_008230522.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75723047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.13e-88NAC domain containing protein 44