PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015878950.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | bZIP | ||||||||
Protein Properties | Length: 373aa MW: 41886.5 Da PI: 8.6029 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25.1 | 3.7e-08 | 243 | 289 | 17 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+ae ++ ele l+++ l +e+ XP_015878950.1 243 AQRSRVRKLQYIAELERNVQALQAEGTEVSAELEFLNQQNLILSMEN 289 89***********************************9998887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.1E-4 | 232 | 291 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.01E-15 | 234 | 282 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.4E-8 | 243 | 285 | No hit | No description |
SuperFamily | SSF57959 | 7.31E-6 | 243 | 285 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence Send to blast |
MANSKGSSNV RNLISSGKHA LLPPKSPFPI VSPSYVDYVH NPAIGSKVIQ KPKEGNTHHQ 60 RTSSESILVE EQPSWLDDLL NEPETPIRRG GHRRSSSDSF AYVDTINISN LDYAAQDDYK 120 YKNMISGPSW GSQDFDHQRD LRHASVYAEM NLAKQKNRTW ESSNVAISPS GLSSVKDNIV 180 RQSSGSFCTQ LEADGILSTA IEKQDVVESG PHDSKTSSEK KECSNPKPSA SETDTKRAKQ 240 QFAQRSRVRK LQYIAELERN VQALQAEGTE VSAELEFLNQ QNLILSMENK ALKQRLESLA 300 QEHLIKYLEH EVLEREIGRL KALYQQQQKP QQQPSSSHRR TNSRELDSQF ANLSLKHKDA 360 NSGRDPVTGP VRI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015878950.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015878950.1 | 0.0 | uncharacterized protein At4g06598-like | ||||
Refseq | XP_024928880.1 | 0.0 | uncharacterized protein At4g06598-like | ||||
Swissprot | Q8W3M7 | 2e-69 | Y4598_ARATH; Uncharacterized protein At4g06598 | ||||
TrEMBL | A0A2P6PCW7 | 0.0 | A0A2P6PCW7_ROSCH; Putative transcription factor bZIP family | ||||
STRING | XP_004299904.1 | 0.0 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5123 | 26 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 1e-114 | bZIP family protein |
Publications ? help Back to Top | |||
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