PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015877895.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family STAT
Protein Properties Length: 719aa    MW: 80952.2 Da    PI: 4.9067
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015877895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT192.74e-602243451122
            STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkky 95 
                     ldvv l+a gqp++k++evvasL yad+g++ve+++d eapLL+s+dG+ef s drp+kll+Grasf+lkisqLsskcdnrLfri+f++pk+++y
  XP_015877895.1 224 LDVVSLDASGQPISKEMEVVASLTYADNGAPVEQTSDGEAPLLASFDGIEFDSCDRPTKLLHGRASFRLKISQLSSKCDNRLFRIRFDVPKMEEY 318
                     89********************************************************************************************* PP

            STAT  96 pfleavskpirCisrsrntrsssltkk 122
                     pfl+a+s pirCisr+rn r ss+t+k
  XP_015877895.1 319 PFLKALSPPIRCISRNRNPRVSSNTWK 345
                     ***********************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.60.120.2002.2E-427174IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF498994.57E-929181IPR013320Concanavalin A-like lectin/glucanase domain
CDDcd103383.26E-55607714No hitNo description
Gene3DG3DSA:3.30.505.108.5E-9610701IPR000980SH2 domain
SuperFamilySSF555509.96E-9612700IPR000980SH2 domain
PROSITE profilePS5000110.849618700IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 719 aa     Download sequence    Send to blast
MVNEAVVENE DYSLLEDLRL EIEIDEKEGS FSLCFWLYLP NSTTFPATII HQENPDGKVA  60
PFLVLNEKKK VMLLPLFPLH KEVLNDSNPA SLGEIPHALM DAELPTEKWV HFGCEVSNNF  120
LRLHIDGEMI GEKPLSSLLK EDSTSSVLRK INLVSRGGDG NCVLGYIKNL KVLSLTSSIK  180
EHYAKDPPLQ LSIDNSSTTE IEEGLDGIWS IVGGKASCRR NFSLDVVSLD ASGQPISKEM  240
EVVASLTYAD NGAPVEQTSD GEAPLLASFD GIEFDSCDRP TKLLHGRASF RLKISQLSSK  300
CDNRLFRIRF DVPKMEEYPF LKALSPPIRC ISRNRNPRVS SNTWKRSSSD VHPTGISQSF  360
VLDEDNLELQ HNSLREAKPS SLSKCMRSGQ DRISATLRGD PPLEPLDEEC NSHAWTANQV  420
ENAFVTSSVR RSENIEEADD SLSYSESVEE KNSTLKNTSS NRNQMSDMSI FKYSLAGLAE  480
RSLLLKEIAN SASNEEILDF ADKVSLYSGC SHHRNQIIMA KRLIEEGRKA WNLISQNNHH  540
VQWESMVFEI EEQFMKIAGC SSRSLSQQDF ELLRRIAGCQ EYVAQENFEQ MWCWLYPVAF  600
TLSREPINAM WSCTTPKWIE GFITKEEAES SLQGPRGLQD PGTFILRFPT SRSWPHPDAG  660
TLVVTYIGSD YTIHHRLLSP DHAYSSAERD EEVQSLQDML LAEPELSRLG RIIRRQCAC
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015877895.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015877895.10.0SH2 domain-containing protein A-like
SwissprotQ56XZ10.0SHB_ARATH; SH2 domain-containing protein B
TrEMBLA0A2P5D9360.0A0A2P5D936_PARAD; STAT transcription factor
STRINGXP_010106738.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67103036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.10.0SH2 domain protein B
Publications ? help Back to Top
  1. Yamada Y,Wang HY,Fukuzawa M,Barton GJ,Williams JG
    A new family of transcription factors.
    Development, 2008. 135(18): p. 3093-101
    [PMID:18701541]