PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015877689.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 319aa    MW: 35307.3 Da    PI: 8.8091
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015877689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.6e-20144194255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + +  r++lg+f+ta eAaka+++a+ +l+g
  XP_015877689.1 144 HYRGVRRRP-WGKYAAEIRDP---NrRGSRVWLGTFDTAIEAAKAYDRAAFRLRG 194
                     8********.**********9...4334*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.04E-31143202No hitNo description
Gene3DG3DSA:3.30.730.103.7E-32143203IPR001471AP2/ERF domain
SMARTSM003801.1E-37144208IPR001471AP2/ERF domain
PfamPF008472.2E-14144194IPR001471AP2/ERF domain
SuperFamilySSF541716.15E-23144204IPR016177DNA-binding domain
PROSITE profilePS5103224.54144202IPR001471AP2/ERF domain
PRINTSPR003671.8E-13145156IPR001471AP2/ERF domain
PRINTSPR003671.8E-13184204IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0051301Biological Processcell division
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MASQQEASAL ELIRQHLLND FASMDSFIAT LNHCTNQIPQ QSQPQYTHTK NNNNNINDLK  60
ISDFLLPNEE SQLEIEVKPQ ITTATNSAKP PNPSRLSNRR PSINVAIPPA TFRLSSPPPQ  120
SMAVSTNSNT TVQSTSDSSN ESKHYRGVRR RPWGKYAAEI RDPNRRGSRV WLGTFDTAIE  180
AAKAYDRAAF RLRGSKAILN FPLEVANSAE PLASIGRKRR REDENANEEM REVKEIKKET  240
TSSSSSTTTS SESKDLICSS ESETSSSHTA ALPVCPTPLT PSNWISVWDS KDVKGIFSVP  300
PLSPLSPHPS WGYSQLMVI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-30141210270ATERF1
3gcc_A1e-30141210270ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1216220RKRRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00572DAPTransfer from AT5G61600Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015877689.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015877689.10.0ethylene-responsive transcription factor ERF105-like
TrEMBLA0A2P5F3R91e-97A0A2P5F3R9_TREOI; AP2/ERF transcription factor
STRINGXP_008234445.11e-95(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108534109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.12e-40ethylene responsive element binding factor 5