PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015875712.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family NAC
Protein Properties Length: 339aa    MW: 39064.6 Da    PI: 4.966
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015875712.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1301.8e-40231522128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevls 94 
                     +pG++F P+de l+ +yL++k+++ +l+  + i ev++y++ P+dL  +  + +eke+yfF++r +ky++g+r+nra k  gyWkatg dk+v++
  XP_015875712.1  23 QPGYKFIPSDELLIGYYLRRKLANLRLPH-NRIFEVELYDWIPKDLSvEYKRRGEKECYFFTSRVRKYKNGNRPNRACKvGGYWKATGADKPVID 116
                     59************************999.77**************9444455788********************65549************** PP

             NAM  95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +  +++l+g kk Lvfy+g+ p+g+kt+W+mhe+r+
  XP_015875712.1 117 RdsNNSLIGYKKALVFYEGKPPNGTKTKWIMHEFRV 152
                     9767778***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-4521177IPR003441NAC domain
PROSITE profilePS5100547.28822179IPR003441NAC domain
PfamPF023656.9E-2024152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
METHIHNHEF QSANRGGTII PKQPGYKFIP SDELLIGYYL RRKLANLRLP HNRIFEVELY  60
DWIPKDLSVE YKRRGEKECY FFTSRVRKYK NGNRPNRACK VGGYWKATGA DKPVIDRDSN  120
NSLIGYKKAL VFYEGKPPNG TKTKWIMHEF RVSEPPPCTR TGPNDMKLDD WVLCKLYENM  180
AAEEESESGE DEEDQELPSL LNVGNNEEEY PEYEEIIAPP ICNYNTNFVQ MDYCNNGGTH  240
LDNLVHIEND QLPVLDNQLA TDHNLQPQKV DNGSQETLQQ PANLINCNNY LEMGNLYAAA  300
VSLVAQPTFN EVHPNSIFKS KYLRDQSMSL PEDNQNGFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-412417717166Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015875712.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015875712.10.0NAC transcription factor 32-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101121642
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.13e-46NAC domain containing protein 25