PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015875429.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 437aa    MW: 47207 Da    PI: 6.199
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015875429.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.16.1e-16234288357
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                     + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L  eN++L k+l  +++++ 
  XP_015875429.1 234 DAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYN 288
                     579*****************************************99999888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.7E-13231288No hitNo description
SMARTSM003384.4E-20232296IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.645234288IPR004827Basic-leucine zipper domain
PfamPF001703.3E-14235287IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.14E-12236286No hitNo description
CDDcd147024.60E-6237288No hitNo description
PROSITE patternPS000360239254IPR004827Basic-leucine zipper domain
PfamPF124984.0E-43303425IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MDRVFSVGEI SDQFWAAQPA TAPAPTTPEE KSKMNRSASE WAFQRFLQEA SASDSSPPSA  60
SDQNDVVEIK IKEQSNPTQP RNSQQQQQQL HANTTNTKNG STASFGVGLP PNVPIDSEEY  120
QAFLKTKLNL ACAAVALSRG PFIKVQDSAS LADCGSQVSN TSQLGTPTTR GTGSDLFGPQ  180
DKGSDGPIGI PSLPMKKNSG VVVRPSTSGS SREQTDDEEN DGETEMTENM DPTDAKRVRR  240
MLSNRESARR SRRRKQAHLT ELETQVSQLR VENSSLLKRL TDISQKYNDA AVDNRVLKAD  300
VETLRAKVKM AEETVKGITG LNPMFHAMSD ISSISMPSFE GSHSDTSTDA AVPVQEDPNH  360
HFYQTASSNP MPPLDPGTNN NLAEIPSAEN VRRNSATAGG NKMGRSASLQ RVASLEHLQK  420
RIRGGGTPSG PQSNGEQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1248255RRSRRRKQ
2250255SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015875429.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015875429.10.0light-inducible protein CPRF2
SwissprotQ990901e-133CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A2P5DKM00.0A0A2P5DKM0_PARAD; Basic-leucine zipper transcription factor
STRINGcassava4.1_007837m1e-168(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.22e-81bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]