PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015874184.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 266aa    MW: 29637.9 Da    PI: 4.6577
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015874184.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.4e-20134184255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd s+   + +r +lg+f+taeeAa a+++a+++++g
  XP_015874184.1 134 HYRGVRRRP-WGKYAAEIRDSSK---KgARLWLGTFDTAEEAALAYDKAALRIRG 184
                     7********.**********543...34*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.7E-32133192IPR001471AP2/ERF domain
SMARTSM003806.8E-38134198IPR001471AP2/ERF domain
CDDcd000184.94E-30134192No hitNo description
PfamPF008471.4E-14134184IPR001471AP2/ERF domain
PROSITE profilePS5103224.065134192IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-23134193IPR016177DNA-binding domain
PRINTSPR003674.4E-11135146IPR001471AP2/ERF domain
PRINTSPR003674.4E-11158174IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MIGNMGLQSD DKAASETILE NVWANFIGGV GHNIEETRNT NASSESSKPW EELPYLDGAD  60
GSMEILQRLP SLGRWISMGA ETWEELLDTT NIPAATNMEQ KQSDNNSSES NLSSNPNKES  120
VNAAERVKKV ATRHYRGVRR RPWGKYAAEI RDSSKKGARL WLGTFDTAEE AALAYDKAAL  180
RIRGPKAYLN FPLDTVVKAS ELDIISNDFI VSNPRKRASR ELEEDEFTCT TGQPAMKRKA  240
SIGDFFDVFE FQDLGTDYLE SLLSSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-28133193464ATERF1
3gcc_A4e-28133193464ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015874184.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015874184.10.0ethylene-responsive transcription factor ERF091
TrEMBLA0A2P6Q4F61e-103A0A2P6Q4F6_ROSCH; Putative transcription factor AP2-EREBP family
STRINGEOY281131e-100(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF95473142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.14e-35ERF family protein