PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015872951.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 229aa    MW: 25719 Da    PI: 8.8544
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015872951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.42.7e-164493255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d s   ++ r +lg+f+ +eeAa a+++a++ l+g
  XP_015872951.1 44 RFLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDRPEEAAMAYDKAARLLRG 93
                    577******.7*********42...36***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.19E-2943101No hitNo description
PROSITE profilePS5103219.61244101IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-2744102IPR001471AP2/ERF domain
SMARTSM003805.8E-3444107IPR001471AP2/ERF domain
PRINTSPR003671.6E-64556IPR001471AP2/ERF domain
SuperFamilySSF541713.79E-1945102IPR016177DNA-binding domain
PfamPF008473.1E-104793IPR001471AP2/ERF domain
PRINTSPR003671.6E-66783IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MDCLESSKIP SPPQNVQNPC RENGEERDSL KVPERVEVKS HGKRFLGVRQ RPSGRWVAEI  60
KDSSQKLRLW LGTFDRPEEA AMAYDKAARL LRGRNTKTNF PSQNYMNTLE ENCRILGKNP  120
RVYDLLRHAA IKNHAARSSS SNILPWKIIG KEDRSVSIDF DAGVEETIVC TSSSNDVEGL  180
KKYCYGAEKL QEQNKLCALS FGSSKVYSSV VVAPSFSASS QCQSWIQES
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-14411081279Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015872951.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015872951.11e-171ethylene-responsive transcription factor ERF017-like
TrEMBLA0A314UUI22e-81A0A314UUI2_PRUYE; Protein PPLZ02
STRINGEMJ122501e-80(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF123492734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-26related to AP2 11