PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015872269.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family NAC
Protein Properties Length: 263aa    MW: 29219.1 Da    PI: 4.2908
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015872269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.23e-14146970128
             NAM  70 tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++++ +r  +sg+Wk++g+  e++s +++ +g + tL fy+g+ap+ +ktdWvm+ey +
  XP_015872269.1  14 NENKDTR--SSGRWKTKGEACELFS-NSSFIGWRSTLEFYEGQAPHEHKTDWVMQEYWI 69 
                     3333444..49**************.999****************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.777191IPR003441NAC domain
PfamPF023653.8E-7867IPR003441NAC domain
SuperFamilySSF1019411.57E-16890IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
FLHTVDIWFF NQPNENKDTR SSGRWKTKGE ACELFSNSSF IGWRSTLEFY EGQAPHEHKT  60
DWVMQEYWIT LRLSEDVSAM GPCSLCRVFL VQNADTASHS TESVVQNAEN YVGQSSSSRQ  120
QVNETGNLSV RERIPVENAP EIDYVSRGDY MELLDLDTPV SPSSSSDSSC VTMSSNECFD  180
SLALLQDLEP ETNNEPVQKD AGCKFNIAAS IKPTEVVICP AFSGTLDKSP NEQVPWTDRS  240
TPGSALLSQI SDKNNLKNPS GNQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015872269.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015870518.10.0NAC domain-containing protein 83-like
RefseqXP_015870655.10.0NAC domain-containing protein 83-like
RefseqXP_015870776.10.0NAC domain-containing protein 83-like
RefseqXP_015871029.10.0NAC domain-containing protein 83-like
RefseqXP_015871167.10.0NAC domain-containing protein 83-like
RefseqXP_015871337.10.0NAC domain-containing protein 83-like
RefseqXP_015871483.10.0NAC domain-containing protein 83-like
RefseqXP_015871536.10.0NAC domain-containing protein 83-like
TrEMBLA0A314YXP45e-79A0A314YXP4_PRUYE; Uncharacterized protein
STRINGEMJ242993e-78(Prunus persica)
STRINGXP_010106034.12e-77(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF105882235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.17e-13NAC transcription factor-like 9