PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015870123.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 195aa    MW: 21527.7 Da    PI: 7.2825
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015870123.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.61.5e-29107165159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +dDgy+WrKYG+K+vk+s++pr+YY+C+s gC+vkk+ver+ +d ++v++tY g Hnhe
  XP_015870123.1 107 MDDGYKWRKYGKKSVKNSPNPRNYYKCSSGGCNVKKRVERDGKDSSYVITTYDGVHNHE 165
                     59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.4E-3294167IPR003657WRKY domain
SuperFamilySSF1182902.75E-27100167IPR003657WRKY domain
PROSITE profilePS5081130.836102167IPR003657WRKY domain
SMARTSM007741.9E-32107166IPR003657WRKY domain
PfamPF031065.6E-23108165IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MDFPVNPNPN YTAQFDPLMM MDFGLEVEDY LKDDDDDDGL GRGGDWRVEQ DCSSAEIFAG  60
GSSTTGSSAA TATSRSSDIK CKNGVKKNKV YGGQRVAFRT KSELEVMDDG YKWRKYGKKS  120
VKNSPNPRNY YKCSSGGCNV KKRVERDGKD SSYVITTYDG VHNHESPAAV YYTQMPVMAP  180
NGWSLQPSSR SSSSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-2595167274WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Involved in defense responses. May act as positive regulator of salicylic acid (SA)-mediated signaling and negative regulator of jasmonic acid (JA)-mediated signaling (PubMed:21030507). {ECO:0000250, ECO:0000269|PubMed:21030507}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015870123.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015870123.11e-144probable WRKY transcription factor 51
SwissprotQ93WU93e-47WRK51_ARATH; Probable WRKY transcription factor 51
TrEMBLA0A061DIH42e-67A0A061DIH4_THECC; WRKY DNA-binding protein 51, putative
TrEMBLA0A2K1ZR013e-68A0A2K1ZR01_POPTR; Uncharacterized protein
STRINGEOX923003e-68(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112034110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.16e-43WRKY DNA-binding protein 51
Publications ? help Back to Top
  1. Yan C, et al.
    Injury Activates Ca2+/Calmodulin-Dependent Phosphorylation of JAV1-JAZ8-WRKY51 Complex for Jasmonate Biosynthesis.
    Mol. Cell, 2018. 70(1): p. 136-149.e7
    [PMID:29625034]