PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015868530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | Dof | ||||||||
Protein Properties | Length: 405aa MW: 42701.9 Da PI: 8.9798 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 127.5 | 4e-40 | 47 | 107 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e++lkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk++ XP_015868530.1 47 PEQILKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKVK 107 68999*****************************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 9.0E-27 | 45 | 105 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.6E-33 | 49 | 105 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.432 | 51 | 105 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 53 | 89 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010052 | Biological Process | guard cell differentiation | ||||
GO:0010118 | Biological Process | stomatal movement | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:1902066 | Biological Process | regulation of cell wall pectin metabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence Send to blast |
MMSPDNMPAA KPPPPPQKQQ QQAAGVKDEN QGSSSGRKAA STTRPPPEQI LKCPRCDSPN 60 TKFCYYNNYS LTQPRHFCKT CRRYWTKGGA LRNVPIGGGC RKNKKVKSCS SSSSRLSGGS 120 DSRDSSSCSD IGGGLKFFHG ISPAMDFQLG GLSFPRLQTS TTAAGIYNYN YNLPLSSFGD 180 SISNNASSSS SSSSCFNLEY QSAAGTSNSL MGFNYPLSLA TGSGGGGGGG GDSNFNGAIQ 240 SSMNVRSSLA SSIESLSCIN QDLHWKLQQQ RLSMLFGGGG GGDSLTTQKD VNAAASSLAL 300 LGNQTTQKSS SQSSSPILFR NLDVSKPHEV CTGSTTTGLQ HQARKEVSSS GDNTAATEWF 360 FGNSYAPPPP VTPTPTNSNS NGNENGNNWN GFQAWNDLQQ YSALP |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015868530.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015868530.1 | 0.0 | dof zinc finger protein DOF5.7-like | ||||
Refseq | XP_015872673.1 | 0.0 | dof zinc finger protein DOF5.7-like | ||||
TrEMBL | A0A061DI28 | 1e-127 | A0A061DI28_THECC; Dof-type zinc finger DNA-binding family protein | ||||
STRING | EOX91892 | 1e-128 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3854 | 34 | 60 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65590.1 | 2e-46 | Dof family protein |