PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015866377.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 362aa    MW: 40379.2 Da    PI: 8.4586
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015866377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.5e-1077117545
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  XP_015866377.1  77 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 117
                     788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.8E-866120No hitNo description
SMARTSM003382.7E-973136IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.41575119IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.63E-777120No hitNo description
PfamPF001702.0E-777117IPR004827Basic-leucine zipper domain
PROSITE patternPS0003608095IPR004827Basic-leucine zipper domain
PfamPF141449.9E-32159234IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MGSQTLSLPK ETQPNLAVSV GHRENWGESN MADASPRTDT STDDTDDKNQ RLERNLSTAI  60
VPSDSSDKSK EKSGDQKTLR RLAQNREAAR KSRLRKKAYV QQLESSRLKL TQLEQELQRA  120
RQQGIFISSS GDQSHSMSGN GALAFDVEYA RWLEENNRQI NELRAAVNSH AGDTELRTIV  180
DNVTAHFDDI FRLKGIAAKA DVFHILSGMW KTPAERCFMW IGGFRSSELL KLLVNQLEPL  240
TEQQLMGIYN LQQSSQQAED ALSQGMEALQ QSLAETLANG SPGPSGSSGN VANYMGQMAM  300
AMGKLGTLEG FLHQADNLRQ QTLQQMHRIL TTRQSARALL AINDYFSRLR ALSSLWLARP  360
RE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015866377.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015866376.10.0transcription factor HBP-1b(c38)-like isoform X1
RefseqXP_015866377.10.0transcription factor HBP-1b(c38)-like isoform X2
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A0D2TRW40.0A0A0D2TRW4_GOSRA; Uncharacterized protein
STRINGGorai.007G352600.10.0(Gossypium raimondii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-138bZIP family protein