PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015866376.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 467aa    MW: 51490.7 Da    PI: 7.7899
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015866376.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.63.5e-10182222545
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  XP_015866376.1 182 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 222
                     788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-7171225No hitNo description
SMARTSM003382.7E-9178241IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415180224IPR004827Basic-leucine zipper domain
CDDcd147089.03E-22182234No hitNo description
PfamPF001702.8E-7182222IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.44E-7182225No hitNo description
PROSITE patternPS000360185200IPR004827Basic-leucine zipper domain
PfamPF141441.5E-31264339IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MGSRTVKIGT EDGKRVVTEM PSYVPPISNS NPIGTEGSTI RSSRISDFGT LEQSLAFRIE  60
DAVDISRNPV YNQIKPGGQT LGNEVQFGAL SKSLASSDVN LSAAIMGSQT LSLPKETQPN  120
LAVSVGHREN WGESNMADAS PRTDTSTDDT DDKNQRLERN LSTAIVPSDS SDKSKEKSGD  180
QKTLRRLAQN REAARKSRLR KKAYVQQLES SRLKLTQLEQ ELQRARQQGI FISSSGDQSH  240
SMSGNGALAF DVEYARWLEE NNRQINELRA AVNSHAGDTE LRTIVDNVTA HFDDIFRLKG  300
IAAKADVFHI LSGMWKTPAE RCFMWIGGFR SSELLKLLVN QLEPLTEQQL MGIYNLQQSS  360
QQAEDALSQG MEALQQSLAE TLANGSPGPS GSSGNVANYM GQMAMAMGKL GTLEGFLHQA  420
DNLRQQTLQQ MHRILTTRQS ARALLAINDY FSRLRALSSL WLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015866376.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015866376.10.0transcription factor HBP-1b(c38)-like isoform X1
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A2P5BIP10.0A0A2P5BIP1_TREOI; Basic-leucine zipper transcription factor
STRINGEOY086450.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-137bZIP family protein