PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc04311.1.g00010.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | GRAS | ||||||||
Protein Properties | Length: 147aa MW: 15533.1 Da PI: 7.1642 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 23.4 | 6.6e-08 | 23 | 52 | 345 | 374 |
GRAS 345 ksdgyrveeesgslvlgWkdrpLvsvSaWr 374 ++ g+ v e +gsl lgW+drpL+sv+aWr Zjn_sc04311.1.g00010.1.am.mk 23 AGAGFGVLEGDGSLALGWHDRPLYSVTAWR 52 3689*************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03514 | 2.3E-5 | 23 | 52 | IPR005202 | Transcription factor GRAS |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
FGPRAHHLAT EQLPRLVTPS SLAGAGFGVL EGDGSLALGW HDRPLYSVTA WRAAGADAAG 60 AVIDTLQEVG RDDGNGRNGI RSSSTPPCDA THGHALTSCR CRAFCSFCSR QPQARTSQHA 120 AERPMNQEED EAQTVRRINH TTTAGAG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1E5UN44 | 7e-12 | A0A1E5UN44_9POAL; DELLA protein DWARF8 |