PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00183.1.g00230.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Nin-like
Protein Properties Length: 171aa    MW: 19115 Da    PI: 9.858
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00183.1.g00230.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK36.21.2e-1114561052
                        RWP-RK 10 lskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                                  + +  ++++kdAA eLg+ +  LK  C  +G++RWP   ++sl
  Zjn_sc00183.1.g00230.1.am.mk 14 VLAVLHMHLKDAADELGITMCHLKFVCHSNGLHRWPGKTVRSL 56
                                  55678*******************************9999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151911.615176IPR003035RWP-RK domain
PfamPF020421.1E-91356IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MPRRRGPSPP WSDVLAVLHM HLKDAADELG ITMCHLKFVC HSNGLHRWPG KTVRSLNSRL  60
DRLIREAAME KASPGALPRW ADHRRRTLSK IAQEARTVIR ELDNIYERIR NPVPELPAPE  120
PEVDGDGTLN LIDSVGVSGA ECTPLSSAFC RHPPGKKGQS KLWTLQPTQL L
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1844359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.17e-06NIN like protein 7