PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zjn_sc00142.1.g00260.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 375aa MW: 41540.1 Da PI: 11.249 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 55.6 | 1e-17 | 52 | 87 | 12 | 47 |
RWP-RK 12 kyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhR 47 +F+l i+dAA eLg+c++ LKriCR +G++RWP R Zjn_sc00142.1.g00260.1.am.mk 52 THFHLRIEDAAAELGICQSSLKRICRSHGVPRWPGR 87 79********************************99 PP | |||||||
2 | RWP-RK | 37.5 | 4.7e-12 | 136 | 175 | 13 | 52 |
RWP-RK 13 yFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 F+l i+d A e +c++ LK iC ++G++RWP k+++l Zjn_sc00142.1.g00260.1.am.mk 136 RFHLRIEDTATEQCICQSSLKSICHKHGVPRWPGTKLSKL 175 7*********************************999986 PP | |||||||
3 | RWP-RK | 28.2 | 3.7e-09 | 285 | 315 | 15 | 45 |
RWP-RK 15 slpikdAAkeLgvclTvLKriCRqyGIkRWP 45 +l ++dAA Lg+++ LK CR +G+ RWP Zjn_sc00142.1.g00260.1.am.mk 285 HLRLNDAAAALGISTDRLKFVCRSNGLCRWP 315 899**************************** PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 12.901 | 25 | 113 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 6.8E-17 | 51 | 87 | IPR003035 | RWP-RK domain |
PROSITE profile | PS51519 | 9.727 | 106 | 195 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 6.4E-11 | 136 | 175 | IPR003035 | RWP-RK domain |
PROSITE profile | PS51519 | 10.33 | 246 | 348 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 9.3E-8 | 284 | 315 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 375 aa Download sequence Send to blast |
MEVLMAAAAG GRMERKRLGF RKEPQKIPCK VAGEVERFWG STACPQWPEK RTHFHLRIED 60 AAAELGICQS SLKRICRSHG VPRWPGRMGI SKVLDEVSRV LQFPNAAPIL QEQGSAGTST 120 TAKISPSDGG LPSETRFHLR IEDTATEQCI CQSSLKSICH KHGVPRWPGT KLSKLAMEAM 180 GRQREQHQGK KVGIVVRKWS PRASARFLMR SLGFFSSQML PQYCRNKAVL VQVQLSKSPQ 240 AMADCPPKQP GRHHRLRRKR PWWCSPCHEE GRLRHRGRKS LGVLHLRLND AAAALGISTD 300 RLKFVCRSNG LCRWPGMTVR MNASIRSGDS LNAKLRRLIQ EAALARAEAS SIAMVASPSS 360 SSPGNDHAGG QKGDS |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP47126 | 3 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G64530.1 | 1e-08 | Nin-like family protein |