PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00142.1.g00260.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Nin-like
Protein Properties Length: 375aa    MW: 41540.1 Da    PI: 11.249
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00142.1.g00260.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK55.61e-1752871247
                        RWP-RK 12 kyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhR 47
                                   +F+l i+dAA eLg+c++ LKriCR +G++RWP R
  Zjn_sc00142.1.g00260.1.am.mk 52 THFHLRIEDAAAELGICQSSLKRICRSHGVPRWPGR 87
                                  79********************************99 PP

2RWP-RK37.54.7e-121361751352
                        RWP-RK  13 yFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                                    F+l i+d A e  +c++ LK iC ++G++RWP  k+++l
  Zjn_sc00142.1.g00260.1.am.mk 136 RFHLRIEDTATEQCICQSSLKSICHKHGVPRWPGTKLSKL 175
                                   7*********************************999986 PP

3RWP-RK28.23.7e-092853151545
                        RWP-RK  15 slpikdAAkeLgvclTvLKriCRqyGIkRWP 45 
                                   +l ++dAA  Lg+++  LK  CR +G+ RWP
  Zjn_sc00142.1.g00260.1.am.mk 285 HLRLNDAAAALGISTDRLKFVCRSNGLCRWP 315
                                   899**************************** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151912.90125113IPR003035RWP-RK domain
PfamPF020426.8E-175187IPR003035RWP-RK domain
PROSITE profilePS515199.727106195IPR003035RWP-RK domain
PfamPF020426.4E-11136175IPR003035RWP-RK domain
PROSITE profilePS5151910.33246348IPR003035RWP-RK domain
PfamPF020429.3E-8284315IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MEVLMAAAAG GRMERKRLGF RKEPQKIPCK VAGEVERFWG STACPQWPEK RTHFHLRIED  60
AAAELGICQS SLKRICRSHG VPRWPGRMGI SKVLDEVSRV LQFPNAAPIL QEQGSAGTST  120
TAKISPSDGG LPSETRFHLR IEDTATEQCI CQSSLKSICH KHGVPRWPGT KLSKLAMEAM  180
GRQREQHQGK KVGIVVRKWS PRASARFLMR SLGFFSSQML PQYCRNKAVL VQVQLSKSPQ  240
AMADCPPKQP GRHHRLRRKR PWWCSPCHEE GRLRHRGRKS LGVLHLRLND AAAALGISTD  300
RLKFVCRSNG LCRWPGMTVR MNASIRSGDS LNAKLRRLIQ EAALARAEAS SIAMVASPSS  360
SSPGNDHAGG QKGDS
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4712633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.11e-08Nin-like family protein