PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00132.1.g00530.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

ZF-HD

Protein Properties

Length: 563aa MW: 62265.7 Da PI: 12.086

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00132.1.g00530.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	31.5	4.2e-10	394	418	3	27
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgE 27 +vrY eC++NhAa++Gg+avDG + Zjn_sc00132.1.g00530.1.am.mk 394 GVRYGECRRNHAARTGGYAVDGGRR 418 79********************875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD125774	0.002	370	414	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Pfam	PF04770	8.9E-8	395	426	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence Send to blast
MGKKLVRLED AASAGGTHTF NCARPGKQSE AVSSAPLVPR VRPARGWRAF LVSLHQAAAH 60 VRSPAAHALV TPGPRFMSAR KLDETDEDGQ KRPCGRARVV RRQRRLRRRA SPLRARTDAI 120 SSERRERRRA WMQPPLRRQK SRFLADAIGH LKFGGSGDFP AVSSARFTAG LRPAGRRDIP 180 LSGRRILEWR DGEERRPCPV LRPHGISRAQ RRPRQVLHVT LSRIETPRVV LLSFRAPVIG 240 TSLYFFSYAH TLPFGCHMSK QWRKSMQQWR RQGRRNRDLL GTDGMMTSTH ELPDEEPASW 300 GRRLASCPLR RRARLAPPPS RHRSHRPSGS TPCHYRLGVN ERVVHVGALC TQHVEQPKPG 360 RLLAAKEVAI MKRLVMVRRC HAPPPPGLGE CCGGVRYGEC RRNHAARTGG YAVDGGRRRW 420 ASGRAGGRRH VGVRGGVQRP MMVGCQGGQR YATCGASEGG GMRPMEAWGH GGVGRRCHKC 480 RGGDWFEAVI STAGAVSTPG GRRLAGRGAD MCLSVEPRGV RVISAIPAHE VTTYASTLFG 540 CFFVTEANVL PAPIFVAAPT EKW

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence Send to blast

MGKKLVRLED AASAGGTHTF NCARPGKQSE AVSSAPLVPR VRPARGWRAF LVSLHQAAAH  60
VRSPAAHALV TPGPRFMSAR KLDETDEDGQ KRPCGRARVV RRQRRLRRRA SPLRARTDAI  120
SSERRERRRA WMQPPLRRQK SRFLADAIGH LKFGGSGDFP AVSSARFTAG LRPAGRRDIP  180
LSGRRILEWR DGEERRPCPV LRPHGISRAQ RRPRQVLHVT LSRIETPRVV LLSFRAPVIG  240
TSLYFFSYAH TLPFGCHMSK QWRKSMQQWR RQGRRNRDLL GTDGMMTSTH ELPDEEPASW  300
GRRLASCPLR RRARLAPPPS RHRSHRPSGS TPCHYRLGVN ERVVHVGALC TQHVEQPKPG  360
RLLAAKEVAI MKRLVMVRRC HAPPPPGLGE CCGGVRYGEC RRNHAARTGG YAVDGGRRRW  420
ASGRAGGRRH VGVRGGVQRP MMVGCQGGQR YATCGASEGG GMRPMEAWGH GGVGRRCHKC  480
RGGDWFEAVI STAGAVSTPG GRRLAGRGAD MCLSVEPRGV RVISAIPAHE VTTYASTLFG  540
CFFVTEANVL PAPIFVAAPT EKW

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP47051	2	2