PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00107.1.g00020.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 507aa MW: 54985.1 Da PI: 10.9381 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.1 | 2.4e-10 | 364 | 423 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr +r NR++A rs +RK +++ eLe++v +L+ e ++L+ ++e+ + e+ +lk+++ Zjn_sc00107.1.g00020.1.am.mk 364 PKRVKRILANRVSAARSKERKVKYMGELERRVHVLQMETSTLAAKVEREQRESMALKTQN 423 5999*********************************************99999999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.1E-14 | 361 | 425 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.622 | 363 | 426 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.2E-10 | 365 | 421 | No hit | No description |
Pfam | PF00170 | 4.0E-9 | 365 | 423 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.3E-9 | 365 | 422 | No hit | No description |
CDD | cd14703 | 1.18E-20 | 366 | 415 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 507 aa Download sequence Send to blast |
MRAGSHLLPS ARHFPFSRTG ARPRFTFCFC ARGLPFAFPL PSPSPSRRRH FTAPLRPSPP 60 RAAGMDDGRG DPARRRLLSL PAGGQGQGLR LPPHAPATDL YSQFQRRFSH SLFLPTPMVP 120 RFPSAASGSG SAFSYYQGTP GLSQPPFFSV DHQRPFIYAG QAAGAVTRSP LSLGAGQGPS 180 SVLPPRGAGH RRSRSDFLFG LSRPNMSVPV PPAVEAAALD SVFGSYRVMG TLGSVVNGAE 240 ERHDHARFPR SWIPANSSDN KAENLAAAGF HGAGPSNPRH CRSLSVDSFM GNLNFEAAGQ 300 ESPNLPLASP TAGNGVGLSR TGSGPFGGPS APTDLVIPNG EFSEADRKKI MANDHLAEIA 360 QTDPKRVKRI LANRVSAARS KERKVKYMGE LERRVHVLQM ETSTLAAKVE REQRESMALK 420 TQNNEMRIRV QAMEQHAQLK DALNEAMRAE VQRLKHAIGE TIDPHAPNSA NLHLGCQMTP 480 QQLLQLQEQP PESQLTLQQQ KPQEETS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025803483.1 | 1e-129 | transcription factor RF2a-like | ||||
TrEMBL | A0A3L6QQY6 | 1e-131 | A0A3L6QQY6_PANMI; Uncharacterized protein | ||||
STRING | Pavir.J03608.1.p | 1e-132 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP14870 | 18 | 20 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 5e-50 | bZIP family protein |