PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00105.1.g01770.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 299aa MW: 32520.2 Da PI: 5.2579 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.9 | 6e-15 | 105 | 158 | 4 | 60 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 k+ rr+ +NRe+ArrsR+RK+ + Le v L+ eN++L ++l ++++k k Zjn_sc00105.1.g01770.1.sm.mkhc 105 AKKMRRMLSNRESARRSRKRKQTHLNDLESQVSRLTDENTSLL---KRLADMSQKYK 158 799*************************************999...55555555554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.7E-16 | 102 | 166 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.9E-13 | 104 | 158 | No hit | No description |
PROSITE profile | PS50217 | 11.381 | 104 | 156 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.4E-13 | 104 | 158 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.52E-12 | 106 | 157 | No hit | No description |
CDD | cd14702 | 1.26E-17 | 107 | 157 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 109 | 124 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 1.6E-22 | 174 | 279 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence Send to blast |
MAGDSGDDVV EVRGGGGGDP GAYAAVLKRK LDLYCAAVAK SMEAKSEESS LMYPNSQASD 60 TSQLISQASF DGNADSQCKL ANSGSSKEQS DDDGDFEETT NPANAKKMRR MLSNRESARR 120 SRKRKQTHLN DLESQVSRLT DENTSLLKRL ADMSQKYKDA TLDNQNLIVD VDMMRRKVHI 180 AEEAVRRVTG ASMLLLPTTS DMPGSSMPLS SCAYDTASSV VPVQGSMRYF LQASLQDDQT 240 ELDLPNAITP LKNGETHTMA ASLRRVASLE NLQKRIHRDS TNSETALPFS DPEALATGK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 118 | 124 | RRSRKRK |
2 | 118 | 125 | RRSRKRKQ |
3 | 120 | 125 | SRKRKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025805357.1 | 1e-132 | light-inducible protein CPRF2-like | ||||
TrEMBL | A0A2S3HFB1 | 1e-131 | A0A2S3HFB1_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A2T7EIZ5 | 1e-131 | A0A2T7EIZ5_9POAL; Uncharacterized protein | ||||
STRING | Si022331m | 1e-126 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7595 | 29 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.1 | 5e-25 | bZIP family protein |